Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00745 ATGTCCTCCTTCAACCCTTTCTCCCCTCCACCCCCCTCCCCTTACTTCACCAACCTCGGCTTCGGCTACTCCATCGCCATCGCCCTCGGCGTCCTCTTCCTCCTCTCCACCCTCATCCTCTCCTCCTACCTCTGCTGCCGCACCCTCCGCCACCGCAACAACAACAACCACCGCCGCCGCCGCGACCACCACCACCACCACGCCCCCGATGGCATCGTGCTCCCGCGCGTGATCTTCGTCGCCGAGGACGACGACGACGAGGCGCGCCAGAACGACGTCGTCTCGGGCCTCGACCAGGCCGTCATAAACTCCTACCCGAAGTTCCCGTACGTTAAGGAAGGTGGTTACGACAGCACGTGCTCGATCTGTCTGTGCGAGTACAAGGACTCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTACTTTCACTTGTGCTGTCTCGACCCGTGGCTCAAGCTTAACGGGTCCTGCCCCGTTTGCCGCAACTCCCCCATGCCCACGCCGCTCTCGACGCCGCTGCAGGAGGTCGTGCCGCTCTCGCAGTACGCCGCAGATGCCAGGGGGAGGAGGTGA 576 0.6372 MSSFNPFSPPPPSPYFTNLGFGYSIAIALGVLFLLSTLILSSYLCCRTLRHRNNNNHRRRRDHHHHHAPDGIVLPRVIFVAEDDDDEARQNDVVSGLDQAVINSYPKFPYVKEGGYDSTCSICLCEYKDSEMLRMMPECRHYFHLCCLDPWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSQYAADARGRR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00745 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Pumo7g00745 191 PANTHER RING-H2 FINGER PROTEIN ATL67 13 188 IPR044289 GO:0016567|GO:0016740
Pumo7g00745 191 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Pumo7g00745 191 SMART ring_2 120 161 IPR001841 -
Pumo7g00745 191 Pfam Ring finger domain 119 162 IPR001841 -
Pumo7g00745 191 SUPERFAMILY RING/U-box 101 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00745 Pumo-Chr7 12458856 12459431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00745 9 182 C3H Transcription Factor Family AT5G06490 37.766 5.10e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00745 - - vra:106773185 330.872