Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00718 ATGGACCCTACTTTCCCTGCGTCTCAAAACAACGCAACGCAACGTATATTCTCCATTATTCAAAACAGAAAAACAAAATCGAAATCACCTTCTTCGAACAGCGTCTCTCTCCGCCGAGAATCGCGAGCTAGGGTTTCCGATCGACGATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACCGGAAGCGCGGGAAGAACGAGGCGGACGACGAGAAGCGCGAGCTCGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGCTCCGCATGCTGGGGAACGGTCGCTGCGAGGCGATGTGCATCGACGGCACGAAGCGGCTCTTGCCACATCCGCGGCAAGATGCACAAGAAGGTGTGGATCGCCGCCGGCGACATCATCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGCCCGACGAGGCCAGGCTTCTGAAAGCCTACGGCGAGCTTCCCGATAGCACGAGGCTCAACGAGGGCATCGGCGCTGGGCTCGACGAGGAGGAGGACGGTGCCGGGAACGATTATATCGAGTTCGAGGATGAGGATATTGATAAGATTTGA 585 0.5744 MDPTFPASQNNATQRIFSIIQNRKTKSKSPSSNSVSLRRESRARVSDRRCRRTREREERTGSAGRTRRTTRSASSCSRRTGRSTRRCSACWGTVAARRCASTARSGSCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDSTRLNEGIGAGLDEEEDGAGNDYIEFEDEDIDKI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00718 194 Pfam Translation initiation factor 1A / IF-1 108 142 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pumo7g00718 194 Gene3D - 38 194 IPR012340 -
Pumo7g00718 194 SUPERFAMILY Nucleic acid-binding proteins 108 193 IPR012340 -
Pumo7g00718 194 CDD S1_IF1A 108 158 IPR001253 GO:0003743|GO:0006413
Pumo7g00718 194 MobiDBLite consensus disorder prediction 22 39 - -
Pumo7g00718 194 PANTHER EIF-1A 104 194 IPR001253 GO:0003743|GO:0006413
Pumo7g00718 194 ProSiteProfiles S1 domain IF1 type profile. 108 145 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pumo7g00718 194 SMART eIF1neu4 84 159 IPR001253 GO:0003743|GO:0006413
Pumo7g00718 194 MobiDBLite consensus disorder prediction 22 79 - -
Pumo7g00718 194 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00718 Pumo-Chr7 11722340 11723464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00718 98 194 Eukaryotic Initiation Factors Gene Family AT2G04520 73.000 1.06e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00718 K03236 - gmx:100777129 171.4