Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo7g00718 | ATGGACCCTACTTTCCCTGCGTCTCAAAACAACGCAACGCAACGTATATTCTCCATTATTCAAAACAGAAAAACAAAATCGAAATCACCTTCTTCGAACAGCGTCTCTCTCCGCCGAGAATCGCGAGCTAGGGTTTCCGATCGACGATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACCGGAAGCGCGGGAAGAACGAGGCGGACGACGAGAAGCGCGAGCTCGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGCTCCGCATGCTGGGGAACGGTCGCTGCGAGGCGATGTGCATCGACGGCACGAAGCGGCTCTTGCCACATCCGCGGCAAGATGCACAAGAAGGTGTGGATCGCCGCCGGCGACATCATCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGCCCGACGAGGCCAGGCTTCTGAAAGCCTACGGCGAGCTTCCCGATAGCACGAGGCTCAACGAGGGCATCGGCGCTGGGCTCGACGAGGAGGAGGACGGTGCCGGGAACGATTATATCGAGTTCGAGGATGAGGATATTGATAAGATTTGA | 585 | 0.5744 | MDPTFPASQNNATQRIFSIIQNRKTKSKSPSSNSVSLRRESRARVSDRRCRRTREREERTGSAGRTRRTTRSASSCSRRTGRSTRRCSACWGTVAARRCASTARSGSCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDSTRLNEGIGAGLDEEEDGAGNDYIEFEDEDIDKI | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo7g00718 | 194 | Pfam | Translation initiation factor 1A / IF-1 | 108 | 142 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Pumo7g00718 | 194 | Gene3D | - | 38 | 194 | IPR012340 | - | |
Pumo7g00718 | 194 | SUPERFAMILY | Nucleic acid-binding proteins | 108 | 193 | IPR012340 | - | |
Pumo7g00718 | 194 | CDD | S1_IF1A | 108 | 158 | IPR001253 | GO:0003743|GO:0006413 | |
Pumo7g00718 | 194 | MobiDBLite | consensus disorder prediction | 22 | 39 | - | - | |
Pumo7g00718 | 194 | PANTHER | EIF-1A | 104 | 194 | IPR001253 | GO:0003743|GO:0006413 | |
Pumo7g00718 | 194 | ProSiteProfiles | S1 domain IF1 type profile. | 108 | 145 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Pumo7g00718 | 194 | SMART | eIF1neu4 | 84 | 159 | IPR001253 | GO:0003743|GO:0006413 | |
Pumo7g00718 | 194 | MobiDBLite | consensus disorder prediction | 22 | 79 | - | - | |
Pumo7g00718 | 194 | MobiDBLite | consensus disorder prediction | 40 | 65 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo7g00718 | Pumo-Chr7 | 11722340 | 11723464 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo7g00718 | 98 | 194 | Eukaryotic Initiation Factors Gene Family | AT2G04520 | 73.000 | 1.06e-45 | 146 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo7g00718 | K03236 | - | gmx:100777129 | 171.4 |