Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00712 ATGGGAAACAGTGAGGAAGGGAAATCTATTAAGACTGGAAGTCCTTCTTCACCTGCAACAACTGATCAGACCAATCAGACCAACCAACCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGCCTATGATGCCACCTTATGGGCCACCTTATGCAGCATTTTATCCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGTGTAGAATCACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCGATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATGAAACAAAAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGCTACAAAATGGTCCTGCTTCGAAAGAGACTGCATCTTCCAAAAAGATTGTGTCAGCTACCCCAGCTAGTGTTGCAGGAACATTAGTTGGACCTGTTGTTTCTTCAGGTATGACCACAGCACTGGAGCTGAGGAACCCTTTGACTGTTCATTCTAAGGCAAATTCCACAAGTGCCCCACAACCTTGTGCAGTTGTGCCTAATGACGCTTGGATACAGAATGAGCGTGAGCTGAAACGGGAAAAGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAGAATGTGTCACTGAAGTCTGAAATAACTCAATTGACTGAAGGTTCTGAGCAGAAGAGGATGGAAAATTCTGCATTGAGGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1026 0.46 MGNSEEGKSIKTGSPSSPATTDQTNQTNQPNIHVYPDWAAMQPMMPPYGPPYAAFYPHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVESPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTAGANETKRKRSREGTPTTDGEGKTELQNGPASKETASSKKIVSATPASVAGTLVGPVVSSGMTTALELRNPLTVHSKANSTSAPQPCAVVPNDAWIQNERELKREKRKQSNRESARRSRLRKQAEAEELARKVEMLTAENVSLKSEITQLTEGSEQKRMENSALRNKPNSGAKLHQLLDTNPRADAVAAG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00712 341 MobiDBLite consensus disorder prediction 67 104 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 298 341 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 251 275 - -
Pumo7g00712 341 Pfam Disordered region downstream of MFMR 101 229 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 154 170 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 171 196 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 1 34 - -
Pumo7g00712 341 Pfam bZIP transcription factor 250 312 IPR004827 GO:0003700|GO:0006355
Pumo7g00712 341 Pfam G-box binding protein MFMR 42 67 IPR012900 -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 79 101 - -
Pumo7g00712 341 Coils Coil 263 297 - -
Pumo7g00712 341 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 315 IPR004827 GO:0003700|GO:0006355
Pumo7g00712 341 MobiDBLite consensus disorder prediction 1 33 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 126 205 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 298 327 - -
Pumo7g00712 341 MobiDBLite consensus disorder prediction 129 153 - -
Pumo7g00712 341 CDD bZIP_plant_GBF1 255 303 IPR045314 GO:0003700|GO:0006355
Pumo7g00712 341 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 318 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo7g00712 341 SUPERFAMILY Leucine zipper domain 254 303 IPR046347 GO:0003700|GO:0006355
Pumo7g00712 341 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
Pumo7g00712 341 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Pumo7g00712 341 Gene3D - 253 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00712 Pumo-Chr7 11680925 11686199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00712 1 341 bZIP Transcription Factor Family AT2G46270 44.175 4.98e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo7g00712 MFMR_assoc 5.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00712 K09060 - gmx:547789 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00712 7 11680925 11686199 Pumo7g00712 7 11680925 11686199 ECH