Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00694 ATGAGTACTCAGTCACAACAACACCACAACAGAAGAGAATTCAAGGAAGAAGAAGAAGAAGAGAAGGAAGAAGAAGAAAACCATTTGCTACATTCAGAATGCGAGACAATACCATTGTCCTCACCCCACACATCACCCTCAGTGTGGGAACGTGGAAACAAAGAAGAAGAAGAAGAAGAAGAGAAGGACACGGTGTATGCAGCCAAGGACAAGGTGCAGATATTCGACTTGGAGTACGCCGGTGGCGGCGGTGCAGGGTCCACGGTGGTGCCACCGTTTTCATGGAGGAAGCTGTGGCTGTTCACGGGGCCGGGGCTGTTGATGAGCGTGGCGTTTTTGGACCCGGGGAACCTTGAAGGGGACCTTCAAGCTGGAGCCATTGCAGGGTACTCATTGCTTTGGCTGTTGATGTGGTCTACCATCATGGGGTTGGTGATACAGCTTCTGTCGGCGAGGCTAGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCCGGGAGGAGTACTCCAATTGGGCCAGGTTGGTGCTGTGGGTCTTGGCTGAGCTGGCTCTCATTGCTGCTGATATTCAAGAGGTTATTGGCAGTGCTATTGCTTTCAGGATTCTTAGCCATGGGCTTCTCCCCATTTGGGCTGGTGTGATTATCACAGCCATGGATTGTTTCTTCTTTCTATTTCTCGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTATTCGCAGTTTTCATTGGAACTATGGGCTTCTCTTTTGCGTGGATGTTCTTCGATACAAAGCCCAGTGAAGAAGAACTAATGATGGGCCTTTTGATCCCAAGAGTTAGTTCAAAGACACTTCGCCAGGCTGTGGAAATTGTGGGGTGTGTGATAACCCCACATAATGTGTTCCTCCATTCTGCATTGGTACAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTCTCAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAGTCACATTGGTGATCAATCTATTTGTGATAACTGTTTTCGCTAGGGTGTTCTACGGTACAGAACAGGCCAACGGCATAGGATTGGTAAATGCAGGGCAGTATCTTGAGGAGAGGTATGGAGGAGGGTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTGTTAGCAGCTGGACAAAGTAGTACCATCACTGGCACATATGCAGGGCAGTTTATAACAGAGGGCTTTCTTAAGCTCAATATAAAGAAGTGGTTGAGGGCATTGATCACTAGAAGTTGTGCTATTGTTCCTACTATGATTTGTGCAATTGTTTTTAATACATCTGAAGGTTCTTTGGATACCTTGAATGAATGGCTAAATGTGGTCCAAGCAATACAGATTCCTTTTGCACTGATCCCCCTTCTAACTTTGGTGTCCAAAGAGGAGGTCATGGGGACCTTCAGAATAGGGCCTATAGTAGAGAGAGTGGCTTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATATATGTTATTAGATTTCTTCCTGGATGAAGTGGATGGAGTGTTGTTTGGTTTTCTAGTCTTCCTTGGCGCTGCAGCATGGATTTCATTTATTATATATCTGGTTCAACACAGTGGTGCCATTTCTTCAATCCTAGTGAGGTCCCCTAATTCCAAAGGCTTTTTCTCTCTTGCTGGAAGCAACTAA 1683 0.4652 MSTQSQQHHNRREFKEEEEEEKEEEENHLLHSECETIPLSSPHTSPSVWERGNKEEEEEEEKDTVYAAKDKVQIFDLEYAGGGGAGSTVVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYSNWARLVLWVLAELALIAADIQEVIGSAIAFRILSHGLLPIWAGVIITAMDCFFFLFLENYGVRKLEGVFAVFIGTMGFSFAWMFFDTKPSEEELMMGLLIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSVALLVTLVINLFVITVFARVFYGTEQANGIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIVFNTSEGSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVERVAWSVAVLVILVYGYMLLDFFLDEVDGVLFGFLVFLGAAAWISFIIYLVQHSGAISSILVRSPNSKGFFSLAGSN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00694 560 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 22 535 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 MobiDBLite consensus disorder prediction 1 63 - -
Pumo7g00694 560 Coils Coil 5 35 - -
Pumo7g00694 560 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 96 474 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 NCBIfam Nramp family divalent metal transporter 103 472 - -
Pumo7g00694 560 Pfam Natural resistance-associated macrophage protein 119 480 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 Hamap Divalent metal cation transporter MntH [mntH]. 84 506 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 281 304 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 177 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 207 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 232 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 388 407 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 416 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00694 560 PRINTS Natural resistance-associated macrophage protein signature 450 469 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00694 Pumo-Chr7 11475274 11478230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00694 59 537 Inorganic Solute Cotransporters AT1G47240 73.695 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00694 K21398 - gmx:100801411 1019.99