Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00685 ATGTCTGCAATCATTATGTTAGAAGAGAAGTGGTATTGTAGTCCAGAAGTGCTCAATGATGGAGTTTGTACATTGTCATCAAATATTTATAGCCTCGGAGTTCTCCTTTTTGAGTTGTTGTGCACTATTGAGTCATGGGAGGCGCATTCAACTGCGATGTTGGATTTGTGTCATAGAATCTTACCTCCTAAATTTCTAGCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCTTCTGCATCCTGAACCTTCTTCTCGTCCCAGTGCCAGGATGATTTTAGAATCTGAAGTTATACGTGAATCAGAGGAATCGAATTCTGTAGATGATGTTGGAATATCTGATGATGAGGCTGAAACAGACCAATTACTACATTTTCTATCTTCACTCAAAGAAGAAAAGCTAAAACAGGCAGCCAAGTTGGAAGAAGAGCTAAATTTCTTGAATGAAGATATTCAGGAGGTAGAAAGAAGTTATTCATTTGGGACAGATTCAGTTTTTCCTTTGGCACAAATGAACAATTCTGAAGTGAGAGGGAATGATTTGCATTTTCAAGATTCTTCTAGTTCAGACATTAGTAGATCCATTCGAAGGTCATTTGGTGATGAAGAAAGATTTATGAGTAACATAAATCAGCTAGAGAATTCTTACTTTTCCACGAGATTCCGAGTCCTGCCAAAAGAAACTTCATCTGTTTCAAGCAATGATAAAAATGTGATGGAAAGTAGATCGAGGTTGCCTCAAGTAGAGCATGCTAGTAAGGAGCCTAGAAGAATTCAGAGTTCTGTCGGTTGTCTAGGATCCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACAGCAAGTTTGAAGAGTGTGGCAGATTAAGAAATAGAGATCTGCTTAGTTCTACCAATGTAATGTGTGCTTTAAGTTTTGACCGCGATGAGGATTACATTGCAGCAGGAGGAGTTTCAAAGAAAATCAAGATTTTTGACCTCAATGCTATTTCAAGCGATTCTATTGACATCCAGTACCCAGTAGTTGAGATGTCAAATAAATCGAAGCTTAGTTGTGTGTGCTGGAACACTTACATAAAAAATCACCTGGCATCTACTGACTATGATGGTGTGGTTCAGATGTGGGATGCAGACACTGGTCAGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCACTTTTCTCTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTGTGGAATATCAGCGAGGCATGCTTTCTTTTATGCATTTTAATAGCAATTCATTACTAA 1305 0.3885 MSAIIMLEEKWYCSPEVLNDGVCTLSSNIYSLGVLLFELLCTIESWEAHSTAMLDLCHRILPPKFLAENPKEAGFCLWLLHPEPSSRPSARMILESEVIRESEESNSVDDVGISDDEAETDQLLHFLSSLKEEKLKQAAKLEEELNFLNEDIQEVERSYSFGTDSVFPLAQMNNSEVRGNDLHFQDSSSSDISRSIRRSFGDEERFMSNINQLENSYFSTRFRVLPKETSSVSSNDKNVMESRSRLPQVEHASKEPRRIQSSVGCLGSFFEGLCKFARYSKFEECGRLRNRDLLSSTNVMCALSFDRDEDYIAAGGVSKKIKIFDLNAISSDSIDIQYPVVEMSNKSKLSCVCWNTYIKNHLASTDYDGVVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNISEACFLLCILIAIHY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00685 434 Coils Coil 124 158 - -
Pumo7g00685 434 Gene3D Transferase(Phosphotransferase) domain 1 6 111 - -
Pumo7g00685 434 SUPERFAMILY WD40 repeat-like 300 420 IPR036322 GO:0005515
Pumo7g00685 434 SUPERFAMILY Protein kinase-like (PK-like) 11 102 IPR011009 -
Pumo7g00685 434 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00685 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 384 IPR001680 GO:0005515
Pumo7g00685 434 MobiDBLite consensus disorder prediction 232 253 - -
Pumo7g00685 434 Pfam Protein kinase domain 10 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00685 434 SMART WD40_4 378 418 IPR001680 GO:0005515
Pumo7g00685 434 SMART WD40_4 286 325 IPR001680 GO:0005515
Pumo7g00685 434 SMART WD40_4 336 375 IPR001680 GO:0005515
Pumo7g00685 434 Pfam WD domain, G-beta repeat 380 418 IPR001680 GO:0005515
Pumo7g00685 434 Pfam WD domain, G-beta repeat 299 325 IPR001680 GO:0005515
Pumo7g00685 434 Gene3D - 269 430 IPR015943 GO:0005515
Pumo7g00685 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 385 420 IPR001680 GO:0005515
Pumo7g00685 434 PANTHER PROTEIN SPA1-RELATED 2 4 422 IPR044630 GO:0009640
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00685 Pumo-Chr7 11373494 11376558 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Pumo7g00685 Pkinase 6.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00685 K16240 - gmx:100802144 747.658