Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00676 ATGGAAGAGAGTATGAAGAGTGAACAAGTTGGTCTCATTGATGAGCTAATGCAAGGGAAGGAGCTAGCAAAGCAGCTCTGTGACCATCTAGTCTCATCATCACCATCATCATCTCATGAAACAAATGAAGTCCTAATTGAGAAAATACTTTACACCTATGAGAAAGCACTTGCCATGCTGAATTGCAAGGCTAATGTAGGAGAAAGTAAGGCCAACAATGGCAGCATGATGGATTCCCATTCTTCTTTCACAAATGGTAGCCCCAAAAGTGAGGTGATGGAGCCTGAGGTTAAGAACAAAGATGTCTGTAAGAAAAGAAAAACCACACCAAAGTGGACAGAACAAGTGAAGGTGTGCTTGGGAACAGGTCATGATGGATCTCTGAATGATGGCTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACATATAGAAATGTTCAAGGATGTCTGGCCACTAAGCAGGTGCAAAAGTCAGATGAAGACCCAATGATATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAAGCAAGTCACTTAAACAGGGCAGTGGCACCCCCATCAAAGCCAAAGGTGAACTTGGGAGAAAATAAGCACCAAACCCATCAAATTAAGAATCAACCACAAGAAGAGAAAATAGAACAACCACCAGAGACAATTTTCTCTTTTGGATCTTCAGGTCTTGAAGTTAAAGTAGAGGATTTGGACCACAAGGAGGACATATTCCCATCATTTTGCTTTTCTTCCCCATCAATAGGGTCAGAAAATGAGGACAACAACAACTGCATATTCTCATATACCATGATTGAGAACAACTTAATGGAAAGCTTCTCTCCTGCATTCATATCTCCAACAACCTCAGATATTGAATCAAATATTTTCTGCCACTGGGGGAGCGCTGGACTAGGCCAAAGTGTGCAAAGCTCAGACTCTGATATCACTGATATAGTTTCAGCACCAACTTCAGTCACCAATTCACCAATAATGGACCTTGATTTCTTGCTTGATAAGATCGATTTCGACACAGATTTCCCTATAAGCACCACAGAACTTTGCACTTGA 1104 0.4139 MEESMKSEQVGLIDELMQGKELAKQLCDHLVSSSPSSSHETNEVLIEKILYTYEKALAMLNCKANVGESKANNGSMMDSHSSFTNGSPKSEVMEPEVKNKDVCKKRKTTPKWTEQVKVCLGTGHDGSLNDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTCTQASHLNRAVAPPSKPKVNLGENKHQTHQIKNQPQEEKIEQPPETIFSFGSSGLEVKVEDLDHKEDIFPSFCFSSPSIGSENEDNNNCIFSYTMIENNLMESFSPAFISPTTSDIESNIFCHWGSAGLGQSVQSSDSDITDIVSAPTSVTNSPIMDLDFLLDKIDFDTDFPISTTELCT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00676 367 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g00676 367 MobiDBLite consensus disorder prediction 73 89 - -
Pumo7g00676 367 FunFam WRKY transcription factor 53 114 191 - -
Pumo7g00676 367 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g00676 367 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g00676 367 MobiDBLite consensus disorder prediction 73 98 - -
Pumo7g00676 367 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g00676 367 Gene3D WRKY domain 114 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g00676 367 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 308 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00676 Pumo-Chr7 11149197 11152498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00676 3 216 WRKY Transcription Factor Family AT5G24110 43.779 6.85e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g00676 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00676 - - gmx:100170747 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00676 7 11149197 11152498 Pumo7g00676 7 11149197 11152498 ECH
Pumo8g02393 8 61115878 61117431 Pumo7g00676 7 11149197 11152498 ECH
Pumo5g03890 5 88960349 88962287 Pumo7g00676 7 11149197 11152498 PCT