Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00660 ATGTTAAGTAATTCCACAAATTTTGTATCAGCTGTCCCTTCACTGAGCTTGACCAATCCATTGCCTGAGTCTTGCTATGTTATTACATGGGTTTCAGTCCCAGTTGCTGGGCCAGAGCAGCAGTATGAGCAGAATTTCAGAGATGAGCTTAGTGAAAATCTACGATTAACATGGGATAGACCTGACTGCAGATATTGTGAATCGCGACATCAATTGTGTGGATTTGATCCAAATAACAACACTCAACTTTTCTGCTTTTCTTACCATACAGGTACTTCACGATGTGGAGTACAAGTTTTTAGAATCATCACAATATGCATTGCTGGACCAGCAACGGTGTTTGCAATCGTGATGGCATGTTGTGTGTGCTACAAGGACAGACTAGCCAACAATCATAACAGTGCCATTGCGAGGTCTGCACCAGCTACAATATCACCAGCGCCACAAATTGTGACCACAGGTCTCGACGAGTCCATGATTGAGTCCTATGAGAAGGTGGTGCTTGGAGAGAGTCGACGATTGCCTGGACCCAACAATGGATGCTGTTGGATATGCCTGTCGGAGTACAATAGCAAAGAGACCATAAGATTGATTCCTGAATGCAAACACTGCTTCCATGCTGACTGCATAGACGAGTGGCTTCGAATCAACACCACGTGCTCGGTTTGTCTTAACTCTCCCTCTCCTTCTCCTCTTCATGTTACCTCCATTGACCCCTAA 720 0.4486 MLSNSTNFVSAVPSLSLTNPLPESCYVITWVSVPVAGPEQQYEQNFRDELSENLRLTWDRPDCRYCESRHQLCGFDPNNNTQLFCFSYHTGTSRCGVQVFRIITICIAGPATVFAIVMACCVCYKDRLANNHNSAIARSAPATISPAPQIVTTGLDESMIESYEKVVLGESRRLPGPNNGCCWICLSEYNSKETIRLIPECKHCFHADCIDEWLRINTTCSVCLNSPSPSPLHVTSIDP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00660 239 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 228 IPR046948 -
Pumo7g00660 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 228 IPR013083 -
Pumo7g00660 239 Pfam Wall-associated receptor kinase C-terminal 22 87 IPR032872 -
Pumo7g00660 239 SUPERFAMILY RING/U-box 181 225 - -
Pumo7g00660 239 ProSiteProfiles Zinc finger RING-type profile. 182 223 IPR001841 -
Pumo7g00660 239 Pfam Ring finger domain 182 223 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00660 Pumo-Chr7 10905474 10909717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00660 21 229 C3H Transcription Factor Family AT2G25410 42.661 8.99e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00660 - - gmx:100798415 432.18