Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00654 ATGATAGTGAAGCGGACGATGAAAACCGAAACGCCGAACCTGAAACGATGTAAGATTGAGGATTCCGAGAATGCGATTCAGAAGAAGCGCAGGGTGAACGGTTTTTACTCGCTGGGAGTGCCAGGGGATGCTGAATATTTCAGCAGCGGTTCTGGCTCTTGGAGCAGCGAAGGATCGTATTGGGATGGTGGCGGTGGTGGTGGTGAGGTTCAGTCCAATTCGAATTCCGTTCTGTTTAATTGGAAAATGGCGAAGGAGGCGCGCCGGCGCCGGCCTCTGCTGCTGCGGTCCTCGCGTGGCCGCGTCCAGAAACTTCCGTCGAGGTTCAATGACTCGGTCCTTGAAGCCGCGGATGGAGACTCGAGCTTTGAAGATAATGATAAGAGTTTTGCGGAGGATGGAAGGGGTGGCATTGGTGTGAGAGTGGAGAAGAGTGATAGTGTTTGTTATTCGTCTAGTGTGGGTAAAAGGACTGTTGTTAAGGCTGAGAGTAATACTTCTGGGATTAGTTTTGAGGGTGTGGACCAAAAGCCCAATGGTGAGAAGAGGAGAGAGGTTTACAAGCCGGAGGATTTTGCTTTGGGGGATATCGTTTGGGCTAAGTGTGGGAAGAGGTACCCGGCTTGGCCTGCTGTGGTGATTGATCCTGTCCTGGAGGCTCCAGAGTCTGTGCTCAGCTGTTGCGTTCCCGGCGCACTTTGCGTGATGTTTTTTGGTTATTCGAAGAATGGAACTCAAAGGGACTACGCATGGGTGAAGCAGGGAATGGTGTTTCCCTTCTCGGAGTTCATGGACAGGTATCAGGGGCAGACCCGGTTGTACAAGAGCAAACCGAGTGACTTCCGCATGGCACTGGAGGAGGCAATGCTGGCAGAAGATGGTGTTCTGGAATCACATTTGGGAAGAGAGGAAGTAACTGATGTAGAAGCTCATCCTGATGGACTTATGGAGGTCACCGGTTCTTATGTTGACGAGGAATACTACGGCCAGGATCAGGATACAAGGTCTTGCGCTGGCTGTGGTCTGATGTTGCCATGCAAAACCATGAAGAAGATTAAGGATTCAAATTGTGCACCCCAATTTTATTGCAAACATTGTGCTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAGGATTTGGCATCATTCAGATGGTGGGAATTGGGTGTGTTGTGATGGTTGTAATGTGTGGGTGCATGCTGAGTGTGATAAAATATCCAACAAACTTTTGAAGGATCTTGAAAATACAGATTACTATTGTCCAGATTGCAAGGGAAAATTCAATTGTAAATTACCAGCATCACAAGCATACAAGTCAGAAACCGAATCAATAGAGAATAGCCAAAAATCTATGATACCTGAGAAAGTATTGGTGGTTTGCAATGGCATGGAAGGAATTTACATCCCAAAACTTCATCTAGTCATGTGCAAGTGTGGCTCTTGTGGTTCAAGGAAGCAGACACTTAGTGAATGGGAAAAACATACAGGTTGCAGAGCAAAAAAATGGAAACATAGTGTGAAAGTGAAAAGTACAATGCTACCACTAGAAAAATGGATGGCAGAAAACATTCCACTGGATGGAATACCCCAGCAGTTAGATCAACAGCAGGTACTGGCCTTTCTGCAAGAGAAGTATGAGCCTGTTAATGCAAAATGGACAACAGAAAGATGTGCTGTTTGCAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATTTGTAACAGATGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCTGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAGAGAGAGTGTTGCCTCTGCCCAGTAAAAGGTGGTGCTCTAAAGCCAACTGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAAATCATGAGGCCATGGAACCTGCCATGGGAATCCTTAAAATTCCTCCTAATTCCTTTGTGAAGACTTGTGTGATCTGTAAACAGAGCCATGGTTCCTGTATAACTTGTTGCAAGTGTGCTACTTATTTTCATGTGATGTGTGCATCAAGGGCAGGATATACAATGGAGTTGCATTCCATGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATATTGTGCAATTCACAGGGTCCCAAATCCAGATTCAGTATTGGTCGTACACACCCCCCTGGGGATTTTCTCTCCCAGAACTTCACTTCAAAATCAGAAGGGATGCTTCAGGGGATCAAGGCTAATTTCATCAAAGAATATAGAGCTTAATGAATCTTCAACCACTGAAAATGACATAGTTGAGCCGCTGTCTGCTGCCAGATGTCGTGTGTACCGAAGGTCTCCTAATAAGAGGGCTGATGTGCCAATAATCCACTTGCTGAGGGGACCCAGCCTTCATTCTTTAGGTGCAATAACTCAGTTGAACGACTTTAAGGATGCTGACGAATCTAAAGTATTCACTTCTTTCAAGGAACGTCTTCACCATTTACGGAAAATGGAAACATTTAGAGTTTGCTTTGGAAAATCGGGCATTCATGGATGGGGTCTCTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGTGGTGTGCATGTAAGGCGTAGTGTCGCTGATCTGAGGGAAGCAAAATACCGTTCAGAAGGCAAAGATTGCTATCTGTTCAAGATCAGCGAGGAAGTGGTAGTTGATGCAACGAACAGCGGCAATATAGCACGTTTAATAAACCATTCTTGCATGCCAAACTGCTATGCAAGGATTATGAGTCTGGGTGATCAGGGGAGCCGGATTGTTCTTATTGCCAAGACCAATGTTTCTGCTGGTGAAGAACTAACGTATGATTACTTATTCGATCCAGATGAGCGGGATGAGCTGAAAGTTCCCTGCCTTTGCAAAGCCCCCAATTGTAGGAGATTTATGAATTAG 2976 0.4483 MIVKRTMKTETPNLKRCKIEDSENAIQKKRRVNGFYSLGVPGDAEYFSSGSGSWSSEGSYWDGGGGGGEVQSNSNSVLFNWKMAKEARRRRPLLLRSSRGRVQKLPSRFNDSVLEAADGDSSFEDNDKSFAEDGRGGIGVRVEKSDSVCYSSSVGKRTVVKAESNTSGISFEGVDQKPNGEKRREVYKPEDFALGDIVWAKCGKRYPAWPAVVIDPVLEAPESVLSCCVPGALCVMFFGYSKNGTQRDYAWVKQGMVFPFSEFMDRYQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLGREEVTDVEAHPDGLMEVTGSYVDEEYYGQDQDTRSCAGCGLMLPCKTMKKIKDSNCAPQFYCKHCAKLRKSKQYCGICKRIWHHSDGGNWVCCDGCNVWVHAECDKISNKLLKDLENTDYYCPDCKGKFNCKLPASQAYKSETESIENSQKSMIPEKVLVVCNGMEGIYIPKLHLVMCKCGSCGSRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWMAENIPLDGIPQQLDQQQVLAFLQEKYEPVNAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVLDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAMGILKIPPNSFVKTCVICKQSHGSCITCCKCATYFHVMCASRAGYTMELHSMEKNGTQITKKLIYCAIHRVPNPDSVLVVHTPLGIFSPRTSLQNQKGCFRGSRLISSKNIELNESSTTENDIVEPLSAARCRVYRRSPNKRADVPIIHLLRGPSLHSLGAITQLNDFKDADESKVFTSFKERLHHLRKMETFRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREAKYRSEGKDCYLFKISEEVVVDATNSGNIARLINHSCMPNCYARIMSLGDQGSRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRRFMN 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00654 991 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 991 IPR025780 -
Pumo7g00654 991 SMART set_7 849 972 IPR001214 GO:0005515
Pumo7g00654 991 ProSiteProfiles Extended PHD (ePHD) domain profile. 611 726 IPR034732 -
Pumo7g00654 991 Pfam PWWP domain 195 291 IPR000313 -
Pumo7g00654 991 SUPERFAMILY SET domain 845 987 IPR046341 -
Pumo7g00654 991 ProSiteProfiles Post-SET domain profile. 975 991 IPR003616 -
Pumo7g00654 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 368 431 IPR013083 -
Pumo7g00654 991 SUPERFAMILY Tudor/PWWP/MBT 185 315 - -
Pumo7g00654 991 CDD PHD_ATX3_4_5_like 559 605 IPR042011 -
Pumo7g00654 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 554 608 IPR013083 -
Pumo7g00654 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 609 727 IPR013083 -
Pumo7g00654 991 Pfam PHD-finger 375 428 IPR019787 -
Pumo7g00654 991 SMART PostSET_3 975 991 IPR003616 -
Pumo7g00654 991 SMART PHD_3 559 606 IPR001965 -
Pumo7g00654 991 SMART PHD_3 375 427 IPR001965 -
Pumo7g00654 991 SMART PHD_3 670 726 IPR001965 -
Pumo7g00654 991 CDD PHD_TCF19_like 376 426 - -
Pumo7g00654 991 ProSiteProfiles PWWP domain profile. 194 263 IPR000313 -
Pumo7g00654 991 SUPERFAMILY FYVE/PHD zinc finger 373 434 IPR011011 -
Pumo7g00654 991 Pfam SET domain 860 965 IPR001214 GO:0005515
Pumo7g00654 991 PANTHER PHD FINGER PROTEINS 80 427 - -
Pumo7g00654 991 ProSiteProfiles SET domain profile. 849 966 IPR001214 GO:0005515
Pumo7g00654 991 SUPERFAMILY FYVE/PHD zinc finger 558 622 IPR011011 -
Pumo7g00654 991 CDD SET_SETD1-like 838 987 - -
Pumo7g00654 991 ProSitePatterns Zinc finger PHD-type signature. 560 605 IPR019786 -
Pumo7g00654 991 Pfam PHD-finger 572 606 - -
Pumo7g00654 991 Gene3D - 182 298 - -
Pumo7g00654 991 FunFam Histone-lysine N-methyltransferase 609 728 - -
Pumo7g00654 991 Gene3D SET domain 830 991 IPR046341 -
Pumo7g00654 991 ProSiteProfiles Zinc finger PHD-type profile. 557 608 IPR019787 -
Pumo7g00654 991 SMART PWWP_4 192 261 IPR000313 -
Pumo7g00654 991 Gene3D - 450 538 IPR010919 -
Pumo7g00654 991 Pfam PHD-zinc-finger like domain 613 725 - -
Pumo7g00654 991 ProSiteProfiles Zinc finger PHD-type profile. 373 429 IPR019787 -
Pumo7g00654 991 FunFam Histone-lysine N-methyltransferase 824 991 - -
Pumo7g00654 991 CDD PWWP_AtATX3-like 195 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00654 Pumo-Chr7 10714501 10722826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00654 332 400 EF-hand Containing Proteins AT5G28340 57.971 7.54e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pumo7g00654 zf-HC5HC2H_2 5e-29 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00654 - - gmx:100793624 1903.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00654 7 10714501 10722826 Pumo7g00654 7 10714501 10722826 ECH