Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00643 ATGAAGATTGAGGTGGGGTTGGGAGGGGTGTGGAATGAGGAAGAGAAAGCGACGGTGTTGGAGGTTCTGGGTCGTGGGGCGTTTGATTACTTGGTGTCGAATTCGGTTTCGAACGAGAATCTGTTAATGGCGTTCGGGAGTGGCGAGAATCTGCAGAACAAGCTCTCGGATTTCGTGGAGCGTCCCAACGCGTCGAACTTCAGTTGGAACTACGCGATCTTCTGGCAAATTTCGCAGTCCAAGTATGGGGATTGGGTTTTGGGGTGGGGTGATGGGTGTTGCAGGGAGCCAAGGGAGGGAGAAGAGGGTGGAGAAGTGAGAGGGAAAGGGAGAGGTGTTGTTGTTTTTGATGATGAGAAGGTGCAGAGGACGAGGAAGAGGGTGTTACAGAAGCTGCACATGACTTTTGGGGGTTCTGATGAGGACAATTATGCTTTTGGGTTGGACCGTGTGACTGACACGGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCCCGGGGGCTTGGGGGTCCAGGTAAGTGTTTTGCTTCTGGGAAGCATTTGTGGATTTCGGATGTGTTGAAATCTGGTTTTGATTACTGTGTGAGGTCTTTCTTGGCCAAATCTGCTGGAATTCAGACTGTTGTTTTGGTGCCTACTGATTTGGGGGTGGTGGAGATGGGGTCTGTGAGGATGGTGGGTGAGAGCTTTGAGTTGTTGCAGGCTGTGAAATCTGTGTTTTCTGCACAGGCATCTTTGGTCCCCCCCAGGGTTAAGCCAATTGCACCATTGGATTTGGTGAGTGAGAAGAGAGATGAGAATGAGAATGGTAATGCTCTTTTTTCTGGTTTGGCAATTGGGGATAAGAATAAGAATAACAACAACAACAATAGTAATAGTAGAGTAGAGGGAGTTGGAGTTCCGAAGATTTTTGGGCAGGATTTGAATTGTGTGACTCAATTCAGGGAGAAACTTGCTGTGAGGAAAATGGAGGAGAGGCCGAGGCCGTGGGGAGGTCATCCCAATGGGAATAGTATTGGGTTTCCGAATGGTGTTCATGCTTCTAGTTGGGGGGCTGGTCAAGTTGTGAGGCAGCTTGGTCCTCCTGAAATTCTTCCTCCTAGGTTGGCCAGCTCCGGCACATTGCCCGGTGCCGGAGCTGGCCAATGGTGTGAGGCATGA 1167 0.4979 MKIEVGLGGVWNEEEKATVLEVLGRGAFDYLVSNSVSNENLLMAFGSGENLQNKLSDFVERPNASNFSWNYAIFWQISQSKYGDWVLGWGDGCCREPREGEEGGEVRGKGRGVVVFDDEKVQRTRKRVLQKLHMTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGLGGPGKCFASGKHLWISDVLKSGFDYCVRSFLAKSAGIQTVVLVPTDLGVVEMGSVRMVGESFELLQAVKSVFSAQASLVPPRVKPIAPLDLVSEKRDENENGNALFSGLAIGDKNKNNNNNNSNSRVEGVGVPKIFGQDLNCVTQFREKLAVRKMEERPRPWGGHPNGNSIGFPNGVHASSWGAGQVVRQLGPPEILPPRLASSGTLPGAGAGQWCEA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00643 388 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 242 IPR025610 -
Pumo7g00643 388 PANTHER MYC 37 283 IPR045084 GO:0003700|GO:0006355
Pumo7g00643 388 MobiDBLite consensus disorder prediction 369 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00643 Pumo-Chr7 10575044 10576210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00643 10 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 54.722 7.15e-118 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00643 - - gmx:100807078 617.076