Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00632 ATGGGAAGGGCTCCTTGTTGTTCCAAAGTGGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACCAAGTATATCCAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCAGGGCTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGGAACATAACTCCAGAAGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGAAATAGATGGTCCCTCATAGCAGGAAGGTTACCAGGGAGAACAGACAATGAAATAAAGAACTATTGGAACACCCATCTAAGCAAAAAGCTGAAAAACCAAGGAACAGAAGACACCAACACACCCAATAGTTTAGAGAATCCCCAACAAGAGCCTGCAAGTGGTGGCAACAAAAAGAAGAAGAACGGTGGCAAAAAGAAGAACAAGCAGAAGAACAAAGGAAGCACAAATAATGCTGAGCCACCGAAGACCCAAGTTTACCTACCAAAACCAATTAGAGTCAAGGCTTTGTACTTGCAAAGAACGGATAGTAACACCTCCACCTTTGATTCCAATTCAGCTAGTGGATCAACAAGCCAAGAGAAGGAGGAAAGCCCCGTGACAAAAGAATCAAACGTGGCTAGTGAAATTGGTAATGTGGGAGAAAGTGATGATGGCTTTGGCTTCTTCATTGAGGACCATGACTTGGTCAACGCCTCAGATATTGAATGCCAGTCTTATTTTCCCACAGATCATGGCACGCTACAGCAACTCTATGAAGAATACTTCCAGCTCTTGAACGTGGACCATGGCCAATTCGATGTGAATTCATTTGCAGAATCTTTACTAGAGTGA 870 0.4264 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKNQGTEDTNTPNSLENPQQEPASGGNKKKKNGGKKKNKQKNKGSTNNAEPPKTQVYLPKPIRVKALYLQRTDSNTSTFDSNSASGSTSQEKEESPVTKESNVASEIGNVGESDDGFGFFIEDHDLVNASDIECQSYFPTDHGTLQQLYEEYFQLLNVDHGQFDVNSFAESLLE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00632 289 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pumo7g00632 289 MobiDBLite consensus disorder prediction 188 225 - -
Pumo7g00632 289 CDD SANT 16 61 IPR001005 -
Pumo7g00632 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pumo7g00632 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pumo7g00632 289 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pumo7g00632 289 MobiDBLite consensus disorder prediction 117 176 - -
Pumo7g00632 289 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 214 - -
Pumo7g00632 289 MobiDBLite consensus disorder prediction 188 207 - -
Pumo7g00632 289 FunFam MYB transcription factor 68 127 - -
Pumo7g00632 289 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pumo7g00632 289 MobiDBLite consensus disorder prediction 117 141 - -
Pumo7g00632 289 FunFam Myb transcription factor 11 67 - -
Pumo7g00632 289 CDD SANT 71 112 IPR001005 -
Pumo7g00632 289 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pumo7g00632 289 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pumo7g00632 289 SMART sant 66 114 IPR001005 -
Pumo7g00632 289 SMART sant 13 63 IPR001005 -
Pumo7g00632 289 Gene3D - 14 66 - -
Pumo7g00632 289 Gene3D - 69 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00632 Pumo-Chr7 10349686 10351410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00632 1 144 MYB Transcription Factor Family AT4G38620 65.972 1.41e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo7g00632 Myb_DNA-binding 9.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00632 K09422 - gmx:100803345 500.745