Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00629 ATGCATTCTGGTGCTGTCTTGGCATTGCCTCCTGTGAGCAATGTGTTCAGGACAAGGGGACCTCATGATTTTGAGGATGACTTTGTGGAGAAAGATCCCACGGGCCGGTACATAAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAAACCGTTTATAGGGGCTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGATGGCCTCTTGCATTCAGTAGATGATCTTGCAAAATTGTATTTTGAAGTTAATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATGATTCTTGGATTGATGATAAGCAGAAAACTGTTAACATGATTACTGAACTTTTCACATCAGGAAATTTAAGGCAATATCGCAAGAAGCATAAATATGTTGAAATGAAAGCAATAAAAGGTTGGGCTAGGCAGATTCTTCATGGCTTAGTATATCTTCACAGTCACAGGCCACCAATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGTGAAGTTAAGATAGGGGACCTTGGTTTGGCAATTGTCATGCAACAACCAACTGCCCGGAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGCATACACTGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAGTATCCCTATAGTGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTTGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGATCCCCAAATTAAGGAGTTTATTGAGAAATGTCTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCCATCCTTTATCCCTTACAACCGCCTAGCAGAACACTGAGAGCATATTCATTCAAGTCTGGTTCTCAATCTATGGACTTGGATTTTGACTACAAACAATTTTCTATGAGTGTCTGCTCTGAAGGCAACCAGGAAAGCCCACATTGTCCTGTTTTTGAAGTGCAGAGGACAAATAAGAACAATGAGTTTAAGTTGAAAGGGACTAAAAAGGATGAAAGCTCAGTATCATTGACCTTGCGTATTGCTGATACATGTGCAGGTCGAGTCAGGAATATACATTTTCTCTTTTACCTTGATACAGATACCGCAGTCTCTGTGGCCACAGAGATGGTTGAACATTTGGAGCTGGCAGATCATGATGTAGATTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTACCTTGGTGGAAGCCCTCACCTGATCATCGCTCATATGAAGAATTAAGTCCTTATAGTACAAATATAGATGGCCAAAACTTAATGGCATGGCCATGGGGTTCTGTCCTAACTAGTATTCCCTCTGAATTGGCTATTGGTCAGGATGGCTTCTCTGGGTTTGATACAACCCCCAAAGAAGATTTTGTGGCGTCTGAGAAGAGCAGCGTTTCCAAAAATGCTAATAATGCTACTTTTGAGGGTGATTATAATTCTTCTCCTATTCTGGTTAAATTGGAAAATCGATATTCACAAGGATCTAGAGCTTCTGAGATGGTTGTTGAAAATACTTCTATGAAAAATGGCAGTTGTCATGATTCCAATGCTGGTGTAAGTTCTAAATGCTTAAGTAGTTCCATCTCTGAACTTGAGATTGGGGATGCATATATTGAGGACTGTAAATTGCAACCAGCAGAGTATTGTGCTGGGGAAGGAGTTGTGATAAATGAATTCCCGAAGAACTCGGGGTCAGTTCTTGGAACATCTATTAATGTTGAGAGCCTGAGAAGTAGTTGTTCTTATGTGTCATCAGAAGAGGACATTGATCTTGAGCTAAAGTTTGAACTTGATGTAATTGAGGCACACTATCAGCATTGGATTGATGAACTTAATAAAATGATGTTGGAGGCATTGGAATCCACCAGAAGGAGATGGGTGGCCAAGAAGAAATTGGCTGTTCAGTAA 2034 0.3997 MHSGAVLALPPVSNVFRTRGPHDFEDDFVEKDPTGRYIRYNEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLLHSVDDLAKLYFEVNLLKSLKHENIIKFYDSWIDDKQKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLVYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEAYTELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTLGIKPASLNKVSDPQIKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPILYPLQPPSRTLRAYSFKSGSQSMDLDFDYKQFSMSVCSEGNQESPHCPVFEVQRTNKNNEFKLKGTKKDESSVSLTLRIADTCAGRVRNIHFLFYLDTDTAVSVATEMVEHLELADHDVDFIAELIDYLIMKLLPWWKPSPDHRSYEELSPYSTNIDGQNLMAWPWGSVLTSIPSELAIGQDGFSGFDTTPKEDFVASEKSSVSKNANNATFEGDYNSSPILVKLENRYSQGSRASEMVVENTSMKNGSCHDSNAGVSSKCLSSSISELEIGDAYIEDCKLQPAEYCAGEGVVINEFPKNSGSVLGTSINVESLRSSCSYVSSEEDIDLELKFELDVIEAHYQHWIDELNKMMLEALESTRRRWVAKKKLAVQ 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00629 677 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00629 677 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 551 - -
Pumo7g00629 677 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00629 677 FunFam probable serine/threonine-protein kinase WNK9 121 300 - -
Pumo7g00629 677 Gene3D - 375 450 - -
Pumo7g00629 677 CDD STKc_WNK 36 295 - -
Pumo7g00629 677 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Pumo7g00629 677 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Pumo7g00629 677 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Pumo7g00629 677 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 434 IPR024678 GO:0004674|GO:0005524
Pumo7g00629 677 SUPERFAMILY Protein kinase-like (PK-like) 40 340 IPR011009 -
Pumo7g00629 677 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00629 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00629 Pumo-Chr7 10272797 10277127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00629 25 437 MAP Kinase Kinase Kinase AT1G64630 61.466 5.77e-172 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo7g00629 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00629 K08867 - gmx:100809602 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00629 7 10272797 10277127 Pumo7g00629 7 10272797 10277127 ECH