Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00624 ATGCCATTGTTGGGGTTTGGCAAGAGAAGCAATGCAGAGAAGGCTCTTGAAGCTCTCAAAGAGTTGCAATGTGAGTCTGGAAAAGTGTTAAGGGATGGCTATTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATATTGTGGAGTTGCATGTTGGAGATAAGGTCCCTGCTGACATGAGAGTAGCGGCTTTGAAAACCTCAACATTGAGGGTTGAGCAAAGTTCTTTAACTGGAGAAGCAATGCCAGTTCTCAAGGGGACAAATCCTGTTTTCTTGGATGACTGTGAGTTGCAGGCTAAGGAAAATATGGTGTTTGCAGGCACCACTGTTGTCAATGGGAGTTGTGTTTGTATTGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACATGAGGCTTCTCAGGAGGAGAGTGACACCCCTTTGAAGAAGAAGCTGGATGAGTTTGGTAACAGGCTTACCACTGCAATTGGGCTAGTTTGTCTCATTGTTTGGGTTATCAACTACAAAAATTTCATTTCTTGGGATGTTGTGGATGGATGGCCCTCAAACATCAAATTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTTGCCCTTGCTGTTGCTGCAATCCCTGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCACTCGGTACGCGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTGGAAACTTTGGGATGTACTACTGTGATATGTTCAGACAAAACTGGCACTTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGACTCATTAGTGTTGATGGCACAACTTATGATCCCAAGGATGGGGGAATTGTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATCTACTTCGATGGTCGCCTTTATAGAGTCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTGTTGGTGGAAAAGATGGGAGTTCCAGATGTGAAGTCAAGGAACAAAATTCGCGATACTACACAACTTGCTGCAAACAACATGATGGATGGCAACATTGTGGTGAAGTTAGGATGCTGTGAGTGGTGGAGTAAAAGATCCAAAAAGGTAGCTACATTGGAGTTTGATCGAATTCGGAAGTCAATGAGTGTCATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTCGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACACGTGCAACTTGCTGATGGATCCTTGGTTCCAATAGATGATCAATGTAGGGAACTACTTCTTCAAAGACTCCAGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTTTCTCATATAACGATGACTTGGGAGAATTTTCAGACTATTATGCTGACACTCATCCTGCTCACAAGAAATTGCTTGATCCAACATACTACTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGCTTAAGAGACCCTCCTCGTGAGGAAGTTCACAAAGCAATTGAGGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAAATCAAATTGTTCTCTAAAGATGAGGATCTCACTGGGCAAAGTTTGACTGGTAAGGAATTCATATCTCTTTCTCATTCAGAACAAGTTAAAATATTGTTGAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAACCAAGACACAAGCAAGAAATTGTTAGACTGCTGAAAGAAATGGGGGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTTGCCGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGTACCATAGTTTCAGCTGTTGCAGAGGGTCGCTCTATTTATAATAACATGAAGTCATTTATCAGGTACATGATATCATCAAATGTTGGGGAAGTAATATCCATATTCTTGACTGCTGCTCTGGGGATCCCAGAATGCATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCTACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGCAGAAGTGATGATCCTCTAATAAGTTCTTGGGTTCTTTTCCGTTATCTGGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTTGGCATCAACCTTGTGAGTGATGGTCACACAATCATAGAATTGTCCCAGCTTCGCAACTGGGGGGAGTGTCCTTCATGGTCTAATTTCACTGTTGCTCCATTTGAGGTTGCTGGGGGTCGAATGATCACATTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAAGTAAAGGCCATGACACTATCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAAGAGAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTAGCCATGTCAATATCATTTGGACTCCATTGCCTCATACTCTACACCCCATTCCTTGCAGAAGTGTTTGGTGTTATTCCACTTAGTTTGAATGAGTGGTTTATGGTGCTTTTAATATCAGCACCTGTTATTCTTATTGACGAGTTTCTAAAATTAGTGGTGAGGAGTCAAAGAAGGTTGTTGACTAAGGAGAAAGAAGCATGA 2841 0.4252 MPLLGFGKRSNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGKIQKQIHEASQEESDTPLKKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWDVVDGWPSNIKFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVDGTTYDPKDGGIVDWGCYNMDANLQVMAEICAVCNDAGIYFDGRLYRVTGLPTEAALKVLVEKMGVPDVKSRNKIRDTTQLAANNMMDGNIVVKLGCCEWWSKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDDQCRELLLQRLQEMSSKGLRCLGFSYNDDLGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSKDEDLTGQSLTGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDPLISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIELSQLRNWGECPSWSNFTVAPFEVAGGRMITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAEVFGVIPLSLNEWFMVLLISAPVILIDEFLKLVVRSQRRLLTKEKEA 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00624 946 Gene3D - 4 934 - -
Pumo7g00624 946 NCBIfam HAD-IC family P-type ATPase 594 706 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g00624 946 NCBIfam HAD-IC family P-type ATPase 195 282 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g00624 946 Pfam E1-E2 ATPase 23 237 - -
Pumo7g00624 946 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 936 IPR023298 -
Pumo7g00624 946 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 267 520 - -
Pumo7g00624 946 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 264 517 IPR023299 GO:0000166
Pumo7g00624 946 PRINTS Sodium/potassium-transporting ATPase signature 250 271 - -
Pumo7g00624 946 PRINTS Sodium/potassium-transporting ATPase signature 874 898 - -
Pumo7g00624 946 FunFam Calcium-transporting ATPase, putative 105 253 - -
Pumo7g00624 946 Pfam haloacid dehalogenase-like hydrolase 254 635 - -
Pumo7g00624 946 PANTHER CALCIUM-TRANSPORTING ATPASE 4 936 - -
Pumo7g00624 946 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 685 939 - -
Pumo7g00624 946 FunFam Calcium-transporting ATPase, putative 10 139 - -
Pumo7g00624 946 Gene3D - 13 141 - -
Pumo7g00624 946 Gene3D - 254 666 IPR023214 -
Pumo7g00624 946 Gene3D - 267 520 IPR023299 GO:0000166
Pumo7g00624 946 Pfam Cation transporting ATPase, C-terminus 706 932 IPR006068 -
Pumo7g00624 946 ProSitePatterns E1-E2 ATPases phosphorylation site. 259 265 IPR018303 -
Pumo7g00624 946 SFLD p-type atpase 238 673 IPR044492 -
Pumo7g00624 946 SFLD Haloacid Dehalogenase 238 673 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 535 545 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 75 89 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 513 524 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 645 657 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 621 640 - -
Pumo7g00624 946 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Pumo7g00624 946 FunFam Calcium-transporting P-type ATPase, putative 515 666 - -
Pumo7g00624 946 SUPERFAMILY Calcium ATPase, transduction domain A 29 137 IPR008250 -
Pumo7g00624 946 SUPERFAMILY HAD-like 255 725 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00624 Pumo-Chr7 10216247 10223026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00624 3 943 Primary Pumps ATPases(2) AT4G00900 78.942 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00624 K01537 - gmx:100792952 1803.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00624 7 10216247 10223026 Pumo7g00624 7 10216247 10223026 ECH