Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00620 ATGTCTCGTTACAACCCCATGTTCCTCGTAATCCTCAGTGTCGTCGTAGGTTTCACGATTCGGTGGTTGCTGTTCAAAACGGGATTGATACACACCATAAAAAACCGCTTCAGAAGGGTCCTAGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTCGACGAAAGCATGCAGCGGAATAATCTTCACCGCAAAGTTTCTCTCTATTTGCATTCTCTTCCTTCAATAGAGGACGCTGACTTCACCAATCTCATAACCGGTAATGACCAAAACGACATCGTTTTGCGCCTCGACTCGAACCAAACTATCGAGGACCGCTTCCTCGGGGCCACACTCTATTGGTTCAACCAAAAAACCGAACCGAACCGGACTTCCTCCTTCGTTCTCAAAATCAGAAAAACCGATAAACGCCGCATTCTCCGCCAGTACCTCGGCCACATCAACACCGTCGCCGACGAGATGGAGAATCAAAGCAAGCGCCATTTGCGGTTGTTCATGAACGCCGACGGTGGCGGAACACGGTGGAGATCCGTTCCGTTCACTCATCCGGCGACGTTTGACACGATGGCGATGGAGAAGGATCTCAAGAACAAAATCAAATCGGATCTCGAATCGTTCCTCAAAGCGAAGCAGTATTACCGGAAACTCGGCCGCGCGTGGAAGCGGAGCTATCTCCTGTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCAATGGCGAACTTGCTCCGCTACGACGTGTTCGACGTGGATCTCTCCAAAATTAGCGGCGATTCGGATCTGAAGTTTCTTTTAACCGAAACGACGGCGAAGTCGATCGTCGTGGTGGAGGATCTGGACCGGTTTCTGGAACCGGAATCGGAGTCGGCGGTTACCGCGTCGGGGATCCAGAGCTTCATGGACGGGATTCTGAGCGCGTGTTGCGGCGAGGAGAGAGTGATGGTGTTCACGATGAACAGCAAGGAGTGCGTGGACCCGAACCTGTTGCGGCCGGGTCGGGTCGACGTGCACATCCACTTTCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGCAGCTACCTCGGCGTGAGGGAGCACAAGCTGTTCGCGCAGGTGGAGGAGATTTTCCGGCACGGCGCGAGTCTCAGCCCCGCCGAGGTCGGCGAGTTGATGATCGCGAATCGGAACTCGCCGAGTCGCGCCATCAAATCGGTGATCGGGGCGCTGCAATCGGACGGTGATGGGAGAAGGTACTCGGATGCGATTGGGCGGCGGATAGAGGGTGATGACGTGGACGAAGCGCCCTGTGGTGGGGATGGCTTCTCTACTGTTAAGGATTTGCGGAAGTTTTACGGTTTCTTCAAATTGCGGAACGCCAGAAGAACTTCTCAACAACAGTCACACTCCTTGCCCCATGATAGATGA 1422 0.5443 MSRYNPMFLVILSVVVGFTIRWLLFKTGLIHTIKNRFRRVLDWFHVYQFLKVPEFDESMQRNNLHRKVSLYLHSLPSIEDADFTNLITGNDQNDIVLRLDSNQTIEDRFLGATLYWFNQKTEPNRTSSFVLKIRKTDKRRILRQYLGHINTVADEMENQSKRHLRLFMNADGGGTRWRSVPFTHPATFDTMAMEKDLKNKIKSDLESFLKAKQYYRKLGRAWKRSYLLYGPSGTGKSSFVAAMANLLRYDVFDVDLSKISGDSDLKFLLTETTAKSIVVVEDLDRFLEPESESAVTASGIQSFMDGILSACCGEERVMVFTMNSKECVDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAQVEEIFRHGASLSPAEVGELMIANRNSPSRAIKSVIGALQSDGDGRRYSDAIGRRIEGDDVDEAPCGGDGFSTVKDLRKFYGFFKLRNARRTSQQQSHSLPHDR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00620 473 Gene3D - 178 346 IPR027417 -
Pumo7g00620 473 PANTHER BCS1 AAA-TYPE ATPASE 47 409 - -
Pumo7g00620 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 403 IPR027417 -
Pumo7g00620 473 Pfam Domain associated at C-terminal with AAA 27 117 IPR025753 -
Pumo7g00620 473 SMART AAA_5 222 348 IPR003593 GO:0016887
Pumo7g00620 473 Pfam ATPase family associated with various cellular activities (AAA) 227 345 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00620 Pumo-Chr7 10167208 10169344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00620 218 346 Calmodulin-binding Proteins AT3G56690 27.465 8.64e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00620 - K08900 gmx:100787809 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00620 7 10167208 10169344 Pumo7g00620 7 10167208 10169344 ECH
Pumo5g03933 5 89455365 89457508 Pumo7g00620 7 10167208 10169344 PCT