Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00599 ATGAGCGGGAAGCCGGTGAGACCTCGTACCCGTGTCGGAAAGTACGAGCTGGGAAAAACCATTGGCGAGGGAAGCTTTGCTAAGGTCAAGTTCGCAAAGAACGTTGAAAATGGTAACCATGTTGCCATCAAAATCCTCGATCGTAACCACGTCCTCCGCCACAAGATGATGGAACAGCTGAAGAAAGAAATTTCGGCTATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTACGAGGTGATGGCAAGCAAAACAAAGATTTATATTGTCCTAGAGTTGGTTAGTGGAGGAGAACTATTTGACAAAATAGCTCAAAATGGGAGACTTAAAGAGGATGAAGCAAGAAGTTATTTCCACCAACTAATCAATGCAGTTGATTACTGCCATAGCAGAGGCGTTTACCACAGAGATTTGAAGAAAATCTTCTTCCTGGACTCAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACGTACGCACAACAGGAGGATGAACTTCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCCTGTGGAGTCATTCTCTTTGTGCTTATGGCCGGATTGGCAGGGCTCAATTTACATGTCCATCATGGTTTTCCCCCTGAGGCAAAGAAACTATTGAAGCGTATTCTTGATCCAAACCCTTTAACAAGGATAAAAGTTCCTGAACTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAACCAGCAACTTTTACAGAGGAAGAGGATGTCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCACAAAGCTTCAATCTTGAAAATCTGTTTGAAAAGCAGACACAAGGGATTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTGCGAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGGTTATAATATTTCTCAGTACAATTATTACCTGCATTAGTCTGCATTATCTATTTTCCAAGACCTATCTTTCATGTGATTGA 1149 0.4047 MSGKPVRPRTRVGKYELGKTIGEGSFAKVKFAKNVENGNHVAIKILDRNHVLRHKMMEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELVSGGELFDKIAQNGRLKEDEARSYFHQLINAVDYCHSRGVYHRDLKKIFFLDSNGVLKVTDFGLSTYAQQEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGLAGLNLHVHHGFPPEAKKLLKRILDPNPLTRIKVPELLEDEWFKKGYKPATFTEEEDVNVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLENLFEKQTQGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKVIIFLSTIITCISLHYLFSKTYLSCD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00599 382 CDD CIPK_C 295 354 - -
Pumo7g00599 382 FunFam Non-specific serine/threonine protein kinase 8 292 - -
Pumo7g00599 382 ProSiteProfiles NAF domain profile. 289 313 IPR018451 GO:0007165
Pumo7g00599 382 Gene3D Phosphorylase Kinase; domain 1 6 94 - -
Pumo7g00599 382 Pfam Protein kinase domain 15 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00599 382 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pumo7g00599 382 SUPERFAMILY Protein kinase-like (PK-like) 12 286 IPR011009 -
Pumo7g00599 382 ProSiteProfiles Protein kinase domain profile. 15 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00599 382 Gene3D Kinase associated domain 1, KA1 288 366 - -
Pumo7g00599 382 Pfam NAF domain 291 352 IPR004041 GO:0007165
Pumo7g00599 382 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Pumo7g00599 382 Gene3D Transferase(Phosphotransferase) domain 1 95 281 - -
Pumo7g00599 382 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00599 Pumo-Chr7 9816902 9822769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00599 9 357 CBL-interacting serine-threonine protein kinases AT1G01140 69.293 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo7g00599 Pkinase 4.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00599 - - gmx:100794136 643.269