Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00596 ATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAAGAAAAGAAGAGGGAGAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGTGAACAGCAACAACAACACTACTCAACAAAAGTTGAAGCATGAAGTGCCACCAAGTGGGGGTTCAAGGACAGACCAGGATCAAAAGCATGCACTTGCGGTGGCGGTGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGTGGAGGTGGCAAGGTTGTCCAAACCTGCTAGCCATGCCAGGGAGCATTATGCTGCTGTTGTGATCCAAACTGCTTTCAGAGGGTATCTTGCTAGAAGAGCACTTCGTGCACTAAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGTCACAATGTGA 492 0.5 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVNSNNNTTQQKLKHEVPPSGGSRTDQDQKHALAVAVATAEAAMATAQAAVEVARLSKPASHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRVTM 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00596 163 SMART iq_5 125 147 IPR000048 GO:0005515
Pumo7g00596 163 MobiDBLite consensus disorder prediction 1 91 - -
Pumo7g00596 163 Gene3D - 123 162 - -
Pumo7g00596 163 MobiDBLite consensus disorder prediction 19 57 - -
Pumo7g00596 163 MobiDBLite consensus disorder prediction 59 88 - -
Pumo7g00596 163 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Pumo7g00596 163 PANTHER IQ-DOMAIN 5-RELATED 1 160 - -
Pumo7g00596 163 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00596 Pumo-Chr7 9698036 9698766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00596 1 160 IQD Protein Family AT4G10640 43.478 3.08e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00596 - - gmx:100786729 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00596 7 9698036 9698766 Pumo7g00596 7 9698036 9698766 ECH