Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00594 ATGCCGGAAAACATGAGCATATCAGTGAATGGACAATCTCAGGTCCCTCCTGGCTTCAGGTTTCATCCAACTGAGGAAGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCTTACGAGAAGATTGACCTCGATGTGATTCGTGACGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGAGAAATGCAAAATAGGAACCACTCCACAGAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACAGGAACACGCACCAATCGCGCCACTGCTGCGGGGTTCTGGAAGGCCACTGGCCGTGACAAAGTCATATACAGCAACGGGAAGAGGATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCGCATGGCCAGAAATCCGATTGGATCATGCATGAATACAGACTAGACGACAACACCACCGGCGACACCAATATTGTGTCCAACGTGATGGGAGATGCTGCTCAGGAAGAAGGGTGGGTGGTGTGTAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCTTTGGCTTCTGGGGAAGGTAGAAGGAGCCACTTGTTTGACTCGTGTGACGAGGGAGCTTTGGAGCAAATACTTCAGCAAATGGGAAGGGGTTGCAAGGAAGAGAGCAGCTATGAAGGCAACTACAACAACTTTGGAAGGTTTGCAAGGCCATATGAGACAGGTCAGAACAATGGCGGCGGATACAACAATGACAGGTTCATGAAGCTGCCAAGCCTAGAGAGCCCGAAATCCGCAAGCATGGAGAGCCAGCACAACAATAATAATGGTGATAACAATGAGCACAACAACAATAATGGGTACCATCCCATTATTCCAGTAGAGATGGGCACGGACAATGAAGGGTCATTCACAACCCACCAGGTGAGTGGTGGTGACCCCAGCATGGTTCACCCATTGGAGGCATCATCATCGTTGGTGGTAGGATCAGGTGGTGGAGGCCTCACCAACTGGGCTGCGTTGGACCGATTGGTTGCTTCTCAACTCAATGGCCAAACCGATGCCTCTAGGCAACTGGCATGTGCCTTCAACGACCCCACCATTGGAGGAGGGTATTGCACTAGCGACCATGATCTTCATCAAATCCCCACCCTCCGATCCTCATCAACACCTTCATCAACGTCCGCACACACTAGACCTTCCCCTGCACCCGCACCATACATCCACCCCACACAGGACTTCACTAGCGAGATTGACCTTTGGAACTTCACCCGATCCACGTCCTCGTTGCTGTCATCCTCCGAACCACTGTGCCACGTGTCCAACACGTCAGTGTAG 1329 0.5049 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTGDTNIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLASGEGRRSHLFDSCDEGALEQILQQMGRGCKEESSYEGNYNNFGRFARPYETGQNNGGGYNNDRFMKLPSLESPKSASMESQHNNNNGDNNEHNNNNGYHPIIPVEMGTDNEGSFTTHQVSGGDPSMVHPLEASSSLVVGSGGGGLTNWAALDRLVASQLNGQTDASRQLACAFNDPTIGGGYCTSDHDLHQIPTLRSSSTPSSTSAHTRPSPAPAPYIHPTQDFTSEIDLWNFTRSTSSLLSSSEPLCHVSNTSV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00594 442 FunFam NAC domain-containing protein 24 179 - -
Pumo7g00594 442 MobiDBLite consensus disorder prediction 259 283 - -
Pumo7g00594 442 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Pumo7g00594 442 MobiDBLite consensus disorder prediction 381 397 - -
Pumo7g00594 442 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Pumo7g00594 442 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Pumo7g00594 442 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Pumo7g00594 442 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 268 - -
Pumo7g00594 442 MobiDBLite consensus disorder prediction 381 407 - -
Pumo7g00594 442 MobiDBLite consensus disorder prediction 260 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00594 Pumo-Chr7 9633002 9635521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00594 1 441 NAC Transcription Factor Family AT2G46770 52.863 1.34e-137 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo7g00594 NAM 4.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00594 - - gmx:100793308 739.954