LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo7g00590	ATGGACACATCAGCCATGCCCAAAGTTTTCTCCACCCAACACAATTGGTATCTGTCCACTCTTTCCTCTGCATTAGACAATGCTAAACTTACACTTACCACCAATGACAACAATTTTAACACCGTTTCTTCTAAACTGATTTACACCTACACCAACGCCATGAATGGTTTTAGTGCAAATTTATCACCTAAGGAACTTGAAGCTCATAAAAGCTCCCTGGGTTACATTTCTTCCATACCAGATCTGCCAGCCAAGCTTGACACAACACACTCACCCCAATTTCTTGGCCTCAAACCCAATGTAGGGGCATGGCCTGCTGCGAAATTTGGTGAAGATGTCATTACTGGGTTGGTGGACAGTGGAGTTTGGCCAGAAAGTGAGAGCTTCAAAGATGAGAGGATGCCTAAAATTCCATTAAGATGGTATGGAAATTGTGAAAGTAGCATCAAATGCAACAAGAAACTCATTGGAGCGAGGTTCTTTAACAAAGGGTTGTTGGCAAAGCACTCCAAATTCGCCACAATTGTGAACTCAACACGTGACACAGAAGGACACGGGACTCACACATCTTCCACCGTAGCTGGGAGCCAAGTTGAGAATGCATCATTCTTTGGCTATGCCAATGGATCAGCGCAAGGAATAGCTTCAAGGGCCAGAATAGCCATTGCAATATTAGATGGGGTTGATGTTCTCTCCTTATCACTTGGCCTTGATGATGTACCCTTGTACAACGACGTTGTTGCTATAGCCACATTTGCAGCCATGGAGAGAGGCATTTTTGTGTCCACGTCAACAGGGAATGCAGGGCCTGAACGTGGAACTCTACATAATGGAATACCATGGGTCATAAACGTGGCTGCAGGCACTTTGGATCGTGAATTTCACGGGACTCTTGCTCTTGGCAATGGGGTCAACATATCTGGCTTGTCACTCTTTCTAGGAAACTTCTCCGCACACCAAGTTCCTATTGTTTTTATGGGCACGTGCGACAATTTAAGGGAACTAGCCAGTGCACGTCGCAAGATTGTGGTGTGTGAAGATAAAAGTGGGACTCTTTCTCATCTTGTGTCTAATATGGACACGGCAAGTGTTGCCGCGGCAGTGTTCATATCAAGTACCACGGACATTTCGTTTTTTAAGGACCGTAGTTTTGCAGGCATCGTAATTAACCCGAGAAATGGAGAAATTGTCAAAGCTTACGTTAAGAGTAACTCTGATGCAAAAGCAAGCGTGTCTTTTAAGATAACAGCTCTAGGTACTAAACCAGCAACAAGTGTGGATCTTTACAGTTCCAGAGGGCCATCAAATAGTTGTCCATTTGTGTTGAAACCGGACATCACTGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATCTTTCAGTGGCACTGTTTGGGTCGAACATCCTTTTCAGTAACTTCAATTTTTTAACTGGCACATCCATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAGAGGAGCACACCCTGATTGGAGCCCTGCAGCTATTAGGTCAGCCATCATAACAACATCGGATATATTCGACAATACTAAGGAAGCCATCAAGGACATTGCTAGTGATTACAAAACAGCCTCTCCTTTAGCCTTGGGAGCTGGTCATGTCAACCCCAACAATGCCCTTGATCCTGGACTTGTTTACGATGTGGGAGTTCAAGATTATGTCAATCTTCTTTGTGCATTGAACTTCACTCAACAAAACATCGCAACCATCACTAGATCCTCATCCTATAATTGCTCCAAACCTTCCTTGGATCTCAATTACCCTTCTTTCATTGCTCTCTTCAGTGGCAACGGTTCTTCAAGGGGTAACTTGGGAATTTCAGAGAACGGTGACAAATGTTGGGGAGGGACAAACAACCTATAA	1896	0.4457	MDTSAMPKVFSTQHNWYLSTLSSALDNAKLTLTTNDNNFNTVSSKLIYTYTNAMNGFSANLSPKELEAHKSSLGYISSIPDLPAKLDTTHSPQFLGLKPNVGAWPAAKFGEDVITGLVDSGVWPESESFKDERMPKIPLRWYGNCESSIKCNKKLIGARFFNKGLLAKHSKFATIVNSTRDTEGHGTHTSSTVAGSQVENASFFGYANGSAQGIASRARIAIAILDGVDVLSLSLGLDDVPLYNDVVAIATFAAMERGIFVSTSTGNAGPERGTLHNGIPWVINVAAGTLDREFHGTLALGNGVNISGLSLFLGNFSAHQVPIVFMGTCDNLRELASARRKIVVCEDKSGTLSHLVSNMDTASVAAAVFISSTTDISFFKDRSFAGIVINPRNGEIVKAYVKSNSDAKASVSFKITALGTKPATSVDLYSSRGPSNSCPFVLKPDITAPGTSILAAWPQNLSVALFGSNILFSNFNFLTGTSMACPHVAGVGALLRGAHPDWSPAAIRSAIITTSDIFDNTKEAIKDIASDYKTASPLALGAGHVNPNNALDPGLVYDVGVQDYVNLLCALNFTQQNIATITRSSSYNCSKPSLDLNYPSFIALFSGNGSSRGNLGISENGDKCWGGTNNL	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo7g00590	631	Gene3D	Peptidase S8/S53 domain	223	564	IPR036852	GO:0004252\|GO:0006508
	Pumo7g00590	631	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	43	602	IPR045051	-
	Pumo7g00590	631	Gene3D	-	568	615	-	-
	Pumo7g00590	631	CDD	Peptidases_S8_3	85	516	IPR034197	-
	Pumo7g00590	631	ProSitePatterns	Serine proteases, subtilase family, serine active site.	480	490	IPR023828	-
	Pumo7g00590	631	ProSiteProfiles	Serine proteases, subtilase domain profile.	83	551	-	-
	Pumo7g00590	631	Pfam	Peptidase inhibitor I9	6	71	IPR010259	-
	Pumo7g00590	631	Pfam	Subtilase family	111	519	IPR000209	GO:0006508\|GO:0008236
	Pumo7g00590	631	SUPERFAMILY	Subtilisin-like	86	555	IPR036852	GO:0004252\|GO:0006508
	Pumo7g00590	631	Gene3D	Peptidase S8/S53 domain	112	221	IPR036852	GO:0004252\|GO:0006508
	Pumo7g00590	631	Gene3D	-	291	419	-	-
	Pumo7g00590	631	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	86	IPR037045	-
	Pumo7g00590	631	PRINTS	Subtilisin serine protease family (S8) signature	479	495	IPR015500	-
	Pumo7g00590	631	PRINTS	Subtilisin serine protease family (S8) signature	110	129	IPR015500	-
	Pumo7g00590	631	PRINTS	Subtilisin serine protease family (S8) signature	181	194	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo7g00590	Pumo-Chr7	9472314	9474269	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo7g00590	1	611	Subtilisin-like Serine Gene Family	AT5G67090	43.011	6.91e-160	474

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo7g00590	-		-	gmx:100787831	887.871