LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo7g00588	ATGACTAATAATCTCAACACCGCTTCTTCTAAGCTGATTTATACCTACACCAACGTCATGAATGGTTTCAGTGCAAATTTGACACCTAAGGAACTTGAAGCCCTCAAAACCTCCCCGGGTTACATTTCTTCTACACCAGATCTGCCAGCCAAACTTGACACAACACACTCACCTCAGTTCCTTGGTCTCAATCCAACCACAGGGGCTTGGCCTGCTGCGAAATTTGGCGAAGATATCATTGTTGGGTTGGTAGACACTGGAGTTTGGCCAGAAAGTGAAAGCTTCAAAGATGAGGGGATGACTGAAATTCCTTCACGATGGAAAGGCCAATGTGAAAGTAGCATCAAATGCAACAAGAAACTCATTGGAGCACGGTTCTTTCACCAAGGGTTACTTGCCAAATACCCTAATCTCGAAACAGTTGAGAACTCAACTCGGGACACAGAAGGCCACGGGACCCACACATCAAGCACTGCAGCTGGAAGCCAAGTTGAGAATGCATCATTCTTTGGCTATGCCAATGGATCAGCGAAAGGAATAGCTTCACGGTCGAGAGTAGCCATGTACAAGGCCGTGTGGGAAGGTAGTGTTTTGTCATCTGATGTAATAGCCGCAATTGATAGTGCAATATCTGATGGGATTGATGTTCTCTCCTTATCAATTGGCCTTGATAATGTACCCTTGTTCAGCGACCCTGTTGCTATAGCTACATTTGCAGCCATGGAGAAAGGAATTTTTGTGTCCACGTCAGCAGGGAATGCTGGGCCATTCCCTGAAACCCTTCATAATGGAATACCATGGGTCATAAATGTGGCTGCTGGAACTTTGGATCGTGAATTGTATGGGACTCTTGCTCTTGGCAATGGAGTCAACATATCTGGCTTGTCACTTTATCTAGGAAACTTCTCCGCACACCAAGTTCCTATTGTTTTTCTGGACTTGTGTGACAATTTGAAGGAACTTGCCAAGTCGAGTGGCAAGATTGTGGTGTGTGAAGACATGAATGAAACCCTTTCTGATCAAGTGTATAATGTGGGTTCGTCAAATGCTCTCGGAGCAGCGTTCATATCAAGTACCACTGACACAACATTTTTCTTAGCGAATGGTTCTGCAGCAATCATTATTAACCCGGGAAATGGAGAAATTGTCAAAGCCTACATCAAGAGTAACTCTGATGCAAAAGCAAGCTTGTCTTTTAAGGTAACAGCTTTAGGTACTAAACCAGCACCGAGTGTGGATATTTACAGCTCCAGAGGGCCTTCAAGTAGTTGTCCATTTGTGTTGAAACCAGACATCACTGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCCAAATCTTTCAGTGGCACTGTTTGGGTCCCAAACCCTTTACAGTAACTTCAATTTTTTAACCGGCACATCCATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAGAGGAGCACACCCTGATTGGAGCCCTGCAGCTATTAGGTCAGCCATTATGACAACATCAGATATATTCGACAATACTAAGGAACCCATCAAGGACATTGCTAGTGATTACAAAACAGCCTCTCCTTTAGCCTTGGGAGCTGGTTATGTCAACCCCAACAAAGCTCTTGACCCTGGACTTGTTTACGATGTGGGAATTCAAGATTACGTCAATCTTCTCTGTGCATTGAACTTCACTCAACAGAACATCACGGCCATCACTAGATCGTCTTCCAATAATTGCTCCAAACCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTCTTCAGTGGCGACGGTTCTTCTAATTCAAGGGTAACTTGGGAATTTCAGAGAACGGTGACCAATATTGGGGAGGGACAAACAATCTATACTGCTAGCGTTACATTCATCAAAGGGTTTAATGTCAGCGTCATCCCAAGCAAATTGGTGTTCAAGGAGAAGAACGAGAAGCTAAGTTACAAGTTAAGGATAGAAGGTCCAAAGGTCGAGGGCTTTGGGTATCTCACTTGGACGGACGTGAAGCATGTGGTGAGGAGCCCTATTGTGGTCACCACCACCGTCAACTCCAATTTCTAG	2064	0.4496	MTNNLNTASSKLIYTYTNVMNGFSANLTPKELEALKTSPGYISSTPDLPAKLDTTHSPQFLGLNPTTGAWPAAKFGEDIIVGLVDTGVWPESESFKDEGMTEIPSRWKGQCESSIKCNKKLIGARFFHQGLLAKYPNLETVENSTRDTEGHGTHTSSTAAGSQVENASFFGYANGSAKGIASRSRVAMYKAVWEGSVLSSDVIAAIDSAISDGIDVLSLSIGLDNVPLFSDPVAIATFAAMEKGIFVSTSAGNAGPFPETLHNGIPWVINVAAGTLDRELYGTLALGNGVNISGLSLYLGNFSAHQVPIVFLDLCDNLKELAKSSGKIVVCEDMNETLSDQVYNVGSSNALGAAFISSTTDTTFFLANGSAAIIINPGNGEIVKAYIKSNSDAKASLSFKVTALGTKPAPSVDIYSSRGPSSSCPFVLKPDITAPGTSILAAWPPNLSVALFGSQTLYSNFNFLTGTSMACPHVAGVGALLRGAHPDWSPAAIRSAIMTTSDIFDNTKEPIKDIASDYKTASPLALGAGYVNPNKALDPGLVYDVGIQDYVNLLCALNFTQQNITAITRSSSNNCSKPSLDLNYPSFIAFFSGDGSSNSRVTWEFQRTVTNIGEGQTIYTASVTFIKGFNVSVIPSKLVFKEKNEKLSYKLRIEGPKVEGFGYLTWTDVKHVVRSPIVVTTTVNSNF	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo7g00588	687	Gene3D	Peptidase S8/S53 domain	78	550	IPR036852	GO:0004252\|GO:0006508
	Pumo7g00588	687	CDD	Peptidases_S8_3	51	502	IPR034197	-
	Pumo7g00588	687	SUPERFAMILY	Subtilisin-like	52	541	IPR036852	GO:0004252\|GO:0006508
	Pumo7g00588	687	Pfam	Subtilase family	76	505	IPR000209	GO:0006508\|GO:0008236
	Pumo7g00588	687	Pfam	Fibronectin type-III domain	581	679	IPR041469	-
	Pumo7g00588	687	Pfam	Peptidase inhibitor I9	8	52	IPR010259	-
	Pumo7g00588	687	Gene3D	-	277	405	-	-
	Pumo7g00588	687	FunFam	Subtilisin-like protease SBT1.5	78	287	-	-
	Pumo7g00588	687	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	52	IPR037045	-
	Pumo7g00588	687	Gene3D	-	554	683	-	-
	Pumo7g00588	687	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	11	679	IPR045051	-
	Pumo7g00588	687	PRINTS	Subtilisin serine protease family (S8) signature	147	160	IPR015500	-
	Pumo7g00588	687	PRINTS	Subtilisin serine protease family (S8) signature	465	481	IPR015500	-
	Pumo7g00588	687	PRINTS	Subtilisin serine protease family (S8) signature	76	95	IPR015500	-
	Pumo7g00588	687	ProSiteProfiles	Serine proteases, subtilase domain profile.	49	537	-	-
	Pumo7g00588	687	ProSitePatterns	Serine proteases, subtilase family, serine active site.	466	476	IPR023828	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo7g00588	Pumo-Chr7	9434364	9436427	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo7g00588	1	668	Subtilisin-like Serine Gene Family	AT5G67090	46.465	0.0	591

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo7g00588	-		-	gmx:100787831	1109.75