Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00584 ATGTTTATTATTTTTTTTCTTCTTTTGGTATGTAATACACATTATATCTCCACAAAGAAATTTCAGATGGTGGGTGGTAACATCAATTCAAGGCAATACAATGATACAACTTCTACCAAAATCTTTGTTGGAGGGTTAGCATGGGAGACTCAAAGGGACACAGTGAGAAGGTACTTTGAGCAGTTTGGAGAGATCTTAGAGGCTGTTGTTATCGCAGACAAGAACACTGGGAGATCTAAGGGTTATGGTTTTGTCACATTCAAGGATCCAGAGGCAGCAATGAAAGCATGTCAGAACCCCTCTCCAATAATTGATGGAAGGAGGGCAAACTGTAATATTGCATCTATTGGTGCAAACAAGAATCGGACACAGGCTCCACAACATGGACGGTTTAGAGCAGCACCTGGTGTGTTGGCCACACCCGCTTATCATGGCCCTTCCTCTACATTTGTCCATCAAAACAGTGGGCAATACACATTTCCTAATTCAACTTTTGGCCGATATACTGGATATTCACAAGACACAATGTACCCCATGAACTGCTATGGGGTATTTGGAGGTCAACAGTTCTCAACTTACTACCCCTCCAATGGGGCATCTGGGCCAGTGGGATTGGTCCATAACATTTACCCTTTTAGTGCCCAGTATCCATACAATAGCCAGGCTCATGGTTTTGGAGTCCAATATCCCCAAATGATGCAGTTCCCAATTCTCCCTAGGCACTATGGCTCAGCTGGTATTCTTGCATTTCCTTCTTCAATGGCAATGCCATCTATTAGTGCAGTTACAACAACAGCAACTACAACAACAACAGAGGCAATAGGAACAATTGGAGGTGCTTCACAAACCGCTGGAACAACTTCTGAACGAAATTCTTCAGCTCAATCTATACAGAGATAA 900 0.4278 MFIIFFLLLVCNTHYISTKKFQMVGGNINSRQYNDTTSTKIFVGGLAWETQRDTVRRYFEQFGEILEAVVIADKNTGRSKGYGFVTFKDPEAAMKACQNPSPIIDGRRANCNIASIGANKNRTQAPQHGRFRAAPGVLATPAYHGPSSTFVHQNSGQYTFPNSTFGRYTGYSQDTMYPMNCYGVFGGQQFSTYYPSNGASGPVGLVHNIYPFSAQYPYNSQAHGFGVQYPQMMQFPILPRHYGSAGILAFPSSMAMPSISAVTTTATTTTTEAIGTIGGASQTAGTTSERNSSAQSIQR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00584 299 Gene3D - 18 131 IPR012677 -
Pumo7g00584 299 SMART rrm1_1 40 112 IPR000504 GO:0003723
Pumo7g00584 299 CDD RRM_RBM24_RBM38_like 39 114 - -
Pumo7g00584 299 MobiDBLite consensus disorder prediction 277 299 - -
Pumo7g00584 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 98 IPR000504 GO:0003723
Pumo7g00584 299 SUPERFAMILY RNA-binding domain, RBD 24 127 IPR035979 GO:0003676
Pumo7g00584 299 PANTHER BOULE-RELATED 29 265 - -
Pumo7g00584 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 116 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00584 Pumo-Chr7 9326329 9328665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00584 35 115 C2H2 Transcription Factor Family AT2G19380 43.210 1.19e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00584 - - gmx:100782484 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00584 7 9326329 9328665 Pumo7g00584 7 9326329 9328665 ECH