Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00577 ATGGATGAGTTGAACGGCGCGATGATGATGACGGAGAATAACAATGCGGAGGTGGTTCGGTGGGAGAGGTTTCTGCCGCGGATGGTGCTCAGAGTGCTGCTTGTAGAAGCTGATCATTCTACTCGCCAAATCATCACTGCGCTTCTTCGCAAATGCAGTTACACAGTTATTTCTGTTGCTGATGGATTGAAGGCATGGGAAACGTTGAATAAGAAGGCACCTGAGCTAGATCTTATATTAACAGAAGTGGAGCTTCCAGCAATATCTGGATTTGCACTTCTTTCTTTAATCATGGAGCATGACATTTGTAAAAACATTCCAGTCATAATGATGTCTTCTCATGATTCAGTTAGCATGGCGTTGAAATGCATGTTAAAAGGGGCAGCTGATTTTCTTATAAAACCCATTCGGAAGAATGAGCTTAGGAACTTGTGGCAACATGTATGGAGAAGGCACGCTATTAGCACTCCTCAAAATACAACATTTTCACCGAAAAAACTTAAAACTGCCTCAGAAGACAATTCTGCAAGCAATAAATCAAGTGGTTCTGTGGCTTCCTCAAAGAAAAACAATGAATGCAGCGAGAGATTAAGTGAGGCTCAAAGCACTTGTACATCGCCAATTTTGGAAGCTGAGAGTACATACGTGGAAAATATGCAGGATGTGCCTCCGGATGTACATCGCCAAGTTATGCAAACTCTTGTGCAGAGCACTTGTACATCCCCAATTTTGGAAGCCGAGAGTACATATGTGGAAAATATGCAGGATGTGCCCCAGCTGAAAAGTTCTAAACTGAACAAAATTGATATGGTGAAGCATGACAAGTTTGCCAAATTTGAAAGGGAATCAGCTAAGCATAATGATGAAACAGAAGATAAATCAATTACAATTGTATCAGAGGCTGCAAGGTGCGACAAAACTTTTGAATTGACAGATTTAAGACTAGAACAAGAGCGTGGTGTTGCTGAACCTGAAATTGAAAACGAGGATGAAATCTTAAAATCTGAGTTAGGCAGAGACAATTCTAATATTAGTACTAAGGTGCATGGATGCAATGCTGAACGGGTGAAACCTTCTAAAGGAGCTATTGACTTGATTGCCACATTTGGAAATCTTCCAAAGCACCCTAATGAAAACTGTAGTCTCAATGGTGGTAATACAACCAAGTTTGATTGTGAATCGCAATTGGAACTTTCCTTAAGAAGTGATTTTCCTGGCAGCTCAGGTAATCAAGCAAGCGAAGCAACTGAGGAATCTCAAAGATTGAACCATTCAAATACTTCTGCCTTTTCTTGGTATAGTAATAGTAAATTGTTGCAGCCTCTTTTTTCAACACCATCGATTACATCTCCTAAAGTAAACAACCCCCGTTGGGATTCTCATGAATCCCATAAATTATCTGGAATTACTTCTGGAAATTGTCAGTATGGTGGCTCAAATCAGAACCTGGAGAATATGATCAGTACAGTCATTGGTCAGTATGGACAAGTTATGCCAAAATTATCAAACAGTCAATGTGGACTCTTACCTTTTTCTGGGGTTATCTCTGATCTTAAATCTGAGGGACATGGTAATGTTTTCACTTCTGTGCTTTATGCACAATCTGGCATTCACCCCATGTGGAATCCAAAACCAGTCTGTCAGAACGAGAGTTCTCCCTTTCCAACAAGTACCTCCTCCCAGTCCAATCCTGAAAGTCACAACTCAGATCAACATGACTGTTCCAATGAAGCTACTTGTCTTAATCAAAATGTAAATGATAAAACTGATTTGGATCTCTCAAGGCATGATTCTCCTGCTGCTGATCAGAGTGCTGGTAATAGTTTATGCCATGATGCTGCAAATCATGTCAATAGTAGTGCATATGGAAACATAGACAGTGGAAATGATGGAAATGCTACTTCAGCTATAGTATCCAAGAACAACCCGGAAGGTTTCAGTGATTATGGTTGTCATAATTATGATGGATTTGGAGTGATAGATTCTCATCGCTCCAGTCAAAGAGAAGCAGCTCTTACCAAGTTTCGACTGAAGCGAAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCAGCGGCCTCGGGTCAAAGGGCAGTTTGTACGCCAAGTACACAATGATCATCCAGTCGCTGAGGCTGGTGGTGATTCATGA 2175 0.4101 MDELNGAMMMTENNNAEVVRWERFLPRMVLRVLLVEADHSTRQIITALLRKCSYTVISVADGLKAWETLNKKAPELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAADFLIKPIRKNELRNLWQHVWRRHAISTPQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNNECSERLSEAQSTCTSPILEAESTYVENMQDVPPDVHRQVMQTLVQSTCTSPILEAESTYVENMQDVPQLKSSKLNKIDMVKHDKFAKFERESAKHNDETEDKSITIVSEAARCDKTFELTDLRLEQERGVAEPEIENEDEILKSELGRDNSNISTKVHGCNAERVKPSKGAIDLIATFGNLPKHPNENCSLNGGNTTKFDCESQLELSLRSDFPGSSGNQASEATEESQRLNHSNTSAFSWYSNSKLLQPLFSTPSITSPKVNNPRWDSHESHKLSGITSGNCQYGGSNQNLENMISTVIGQYGQVMPKLSNSQCGLLPFSGVISDLKSEGHGNVFTSVLYAQSGIHPMWNPKPVCQNESSPFPTSTSSQSNPESHNSDQHDCSNEATCLNQNVNDKTDLDLSRHDSPAADQSAGNSLCHDAANHVNSSAYGNIDSGNDGNATSAIVSKNNPEGFSDYGCHNYDGFGVIDSHRSSQREAALTKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQVHNDHPVAEAGGDS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00577 724 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 198 IPR045279 GO:0009736
Pumo7g00577 724 MobiDBLite consensus disorder prediction 543 576 - -
Pumo7g00577 724 SUPERFAMILY CheY-like 30 158 IPR011006 -
Pumo7g00577 724 MobiDBLite consensus disorder prediction 401 423 - -
Pumo7g00577 724 ProSiteProfiles CCT domain profile. 668 710 IPR010402 GO:0005515
Pumo7g00577 724 Gene3D - 28 247 - -
Pumo7g00577 724 MobiDBLite consensus disorder prediction 159 201 - -
Pumo7g00577 724 Pfam CCT motif 668 710 IPR010402 GO:0005515
Pumo7g00577 724 SMART REC_2 30 145 IPR001789 GO:0000160
Pumo7g00577 724 Pfam Response regulator receiver domain 32 143 IPR001789 GO:0000160
Pumo7g00577 724 CDD psREC_PRR 32 135 - -
Pumo7g00577 724 ProSiteProfiles Response regulatory domain profile. 31 149 IPR001789 GO:0000160
Pumo7g00577 724 MobiDBLite consensus disorder prediction 589 608 - -
Pumo7g00577 724 MobiDBLite consensus disorder prediction 545 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00577 Pumo-Chr7 9225401 9231481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00577 631 713 Response Regulator Gene Family AT5G24470 56.627 2.20e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pumo7g00577 Response_reg 2.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00577 K12130 - gmx:100791698 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00577 7 9225401 9231481 Pumo7g00577 7 9225401 9231481 ECH