Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00575 ATGGAAGCACAAAGCTCTCAGCATACACAAGTTATTGAGATCAGTGGAGATTGTCCTGATGGGGGAAGGAAGATTTGTGGGGAAGCACCCTGTGGGTTTGCAGATGCTGGATCCATCTCTAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTTTTCATGGCAGTGGTCCTTTGTGTTATTTTCATGACCGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTCTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGGATTCTGGTATACGAAGCCATTGATAGAATCATTGCCGGTCCTAAAAGTGTGGATGGTTTTTTAATGTTTTTAGTTGCTGCTTTTGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGATGGTCATGGTCATGGTCACGGTCACAGCCATGGACATGGACATGATGGTCATGGCCACAGTCATGGATTTACAGTGTCTACCCATCATGATGCAAAGCATACAAAAGATGAGCACCATCACACACATGATGATCATGCACACCATCATGATGAAAACCATCCAAAAGATGCTCACCATCATACTCATGAAGATCACTTGCACCATCATGATCACAAAGAGCTAACTGAACCTCTTCTTGGTGAATCAAAAGGTGGAACTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTTCTTGGGGACTCTATCCAGAGTATTGGGGTAATGATTGGGGGAGCAGTCATATGGTATAACCCTCATTGGCAAATAGTTGATTTAATCTGCACTCTAATCTTTTCAGTAATTGTTTTGGGGACAACTATCAATATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTATTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCATATATGGGCCATTACAGTGGGAAAGGTTTTGCTGGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACTTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGTCATGTCACTATACAGATAGAGCGCTAG 1260 0.4254 MEAQSSQHTQVIEISGDCPDGGRKICGEAPCGFADAGSISKDSEERSTSMRKLFMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHSHGHGHDGHGHSHGFTVSTHHDAKHTKDEHHHTHDDHAHHHDENHPKDAHHHTHEDHLHHHDHKELTEPLLGESKGGTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYNPHWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADLVLDKVIDYIKRVYNISHVTIQIER 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00575 419 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 347 418 IPR036837 -
Pumo7g00575 419 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 6 419 - -
Pumo7g00575 419 MobiDBLite consensus disorder prediction 183 271 - -
Pumo7g00575 419 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 342 IPR027469 -
Pumo7g00575 419 Pfam Cation efflux family 53 341 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pumo7g00575 419 NCBIfam cation diffusion facilitator family transporter 50 419 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pumo7g00575 419 Gene3D Cation efflux protein transmembrane domain 49 340 IPR027469 -
Pumo7g00575 419 MobiDBLite consensus disorder prediction 200 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00575 Pumo-Chr7 9200754 9202946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00575 24 419 Inorganic Solute Cotransporters AT3G61940 58.438 1.41e-142 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00575 K14689 - gmx:100794876 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00575 7 9200754 9202946 Pumo7g00575 7 9200754 9202946 ECH