Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00572 ATGCAGCTCAAACATGTGGAAGAAGAGGAAGATGGCATCCTTTTTGCCATGAACATGATGTCTATTATGGTGTATCCATTTGCGGTTAGGACCGCGACTGAGCTGGGGATCTTTGACATCATAGCCAAAGCAGGTGAAGGTGCAAAGCTCTCAGCAGAGGACATAGCAGCTCAGCTTGGCAAAAAGAACCCTGAAGCACCCACAATGCTTGACCGTGTTCTTAGGTTATTGTCTAGTCACTCCATGCTATCATCATCTCTTGCAGCTGAAGATCATGGCCAAAAGTCTCCTAAGAGGGTCTATAGTCTCACCTATGCCTCCAAGTATTTTGTCATTGATGCTGATGGTGTCTCGTTCGCAGCTACCTTGAACTTGCTTCACGACAAGATCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATCTTGGAAGGGGGTGTAGCATTCAACAGGGTTCATGGCATGCACACATTTGAGTACCCAGCTGTGGATCCTAGGTTCAATGATGTTTTCAACAAAGCTATGTTCAACCTTACTACTATAGTCATGAAAAGGGTTCTTGAGTTCTACGAAGGTTTTGAGAACATTAATAGGCTTGTGGATGTTGGTGGTAGTCTTGGAATCAATCTCAACCTAATCACTTCTAAATATCCCCATCTTCAAGGTGTTAATTTTGACTTGCCTCATGTCATAGCGCATGCCCCTACCTACCCCGGCGTTGAACATGTTGGAGGAGATTTTTTTGAGAGTGTTCCTAACGGAGACGCCATTTTTATGAAGTGGGTACTTCAGGATTGGAGTGATGAACACTGCTTGAAGTTGTTGAAGAATTGCCATAAAGCTATTCCTAGTGATGGAAAAGTGATTGTTGTGGACTTAATGCTTCCCGTTTTGCCCGATAGCACGGTTTCTGCTAGGAGTGGTTTCCAAGCTGACCTGTTAATGATGACTCAAAGCCCAGGAGGAAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTAGGTTCTGGATTCAGTGGCATCAAATTCGTTTGCTGTGTCTCTGGCTTCTGGGTCATGGAGTTTTTCAATGTTAGCAAGAGAAATTATGATTTCCAACTAATTTCATACTCCCTCCATTCCTTTTTAAGTGTCATATTTTTTAAATTTTTTGTTTTTATTTATTTGTCGTTTGTAAAATTTAAGATTACATTAATTATACTTTTATCAATTATACCCTTATTTATTTCCGAATCTTTAATTAATTTACACATGCATTTATTTGAAGCCACGCACCTCAAACATGTGGAAGAGGACCAAGATGGCATCCTTTTCGCCATGAACATGATGTCTATTATGGTGTATCCATTTGCAGTTAGGACCGCGACTGAGCTGGGGATCTTTGACATCATAGCCAAAGCAGGTGAAGGTGCAAAGCTCTCAGCAGAGGACATAGCAGTTCAACTTGGCACAAAGAACCCTGAAGCACCCACAATGCTTGACCGTGTTCTCAGGTTATTGTCTAGTCACTCCATGCTATCATCATCTCTTGCAGCTGAAGATCATGGCCAAAAGTCTCCCAAGAGGGTCTACAGTCTCACCTATGCCTCCAAGTATTTTGTCACTGATGCTGATGGTATCTCTTTCGGAGCTACCTTGAACTTGCTTCACGACAAGGTCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATCATGGAAGGGGGTGTAGCATTCAACAGGGTTCATGGCATGCACGCATTTGAGTACCCAGCTGTGGATCCTAGGTTCAATGATGTTTTCAACAAAGCAATGTTCAACTTGACCACTATAGTCATGAAGAGGGTCCTTGAGTTCTACGAAGGTTTTAAGAACATTAATAGGCTAGTGGATGTTGGTGGTGGTCTTGGGACCAATCTCAATCTAATCATTTCTAAATATCCCCATCTTCAAGGTGTTAATTTTGACTTGCCACATGTCATAGAGCATGCCCCTAGCTACCCCGGCGTGGAACATGTAGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGACGCCATTTTTATGAAGTGGGTACTTCACGATTGGAGTGATGAACACTGCTTGAAGTTGTTGAAGAATTGCCACAAAGCCATTCCTAGTGATGGAAAAGTGATTGTTGTGGACTTGATGCTTCCCGTTTTGCCCGATAGTACAACTTCTGCCAAGAGTGGTTTCCAAGCTGACCTCTTAATGATGACTCAAAACCCAGGAGGGAAAGAGAGAACCCAGCACGAATTCATGGAATTGGCATTAGGTTCTGGATTCTGTGGCATCACATTCGTTTGCTGTGTCTCTGGCTTTTGGGTTATGGAGTTTTATAAGTAG 2349 0.4304 MQLKHVEEEEDGILFAMNMMSIMVYPFAVRTATELGIFDIIAKAGEGAKLSAEDIAAQLGKKNPEAPTMLDRVLRLLSSHSMLSSSLAAEDHGQKSPKRVYSLTYASKYFVIDADGVSFAATLNLLHDKIFLESWTELKGAILEGGVAFNRVHGMHTFEYPAVDPRFNDVFNKAMFNLTTIVMKRVLEFYEGFENINRLVDVGGSLGINLNLITSKYPHLQGVNFDLPHVIAHAPTYPGVEHVGGDFFESVPNGDAIFMKWVLQDWSDEHCLKLLKNCHKAIPSDGKVIVVDLMLPVLPDSTVSARSGFQADLLMMTQSPGGKERTQNEFMELALGSGFSGIKFVCCVSGFWVMEFFNVSKRNYDFQLISYSLHSFLSVIFFKFFVFIYLSFVKFKITLIILLSIIPLFISESLINLHMHLFEATHLKHVEEDQDGILFAMNMMSIMVYPFAVRTATELGIFDIIAKAGEGAKLSAEDIAVQLGTKNPEAPTMLDRVLRLLSSHSMLSSSLAAEDHGQKSPKRVYSLTYASKYFVTDADGISFGATLNLLHDKVFLESWTELKGAIMEGGVAFNRVHGMHAFEYPAVDPRFNDVFNKAMFNLTTIVMKRVLEFYEGFKNINRLVDVGGGLGTNLNLIISKYPHLQGVNFDLPHVIEHAPSYPGVEHVGGDMFESVPNGDAIFMKWVLHDWSDEHCLKLLKNCHKAIPSDGKVIVVDLMLPVLPDSTTSAKSGFQADLLMMTQNPGGKERTQHEFMELALGSGFCGITFVCCVSGFWVMEFYK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00572 782 SUPERFAMILY "Winged helix" DNA-binding domain 7 111 IPR036390 -
Pumo7g00572 782 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 356 IPR029063 -
Pumo7g00572 782 CDD AdoMet_MTases 622 717 - -
Pumo7g00572 782 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 358 IPR016461 GO:0008168
Pumo7g00572 782 FunFam Caffeic acid 3-O-methyltransferase 420 534 - -
Pumo7g00572 782 FunFam Caffeic acid O-methyltransferase 535 782 - -
Pumo7g00572 782 SUPERFAMILY "Winged helix" DNA-binding domain 431 537 IPR036390 -
Pumo7g00572 782 Gene3D - 1 110 IPR036388 -
Pumo7g00572 782 Gene3D - 422 534 IPR036388 -
Pumo7g00572 782 Gene3D Vaccinia Virus protein VP39 535 782 IPR029063 -
Pumo7g00572 782 Gene3D Vaccinia Virus protein VP39 112 358 IPR029063 -
Pumo7g00572 782 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Pumo7g00572 782 Pfam Dimerisation domain 452 502 IPR012967 GO:0046983
Pumo7g00572 782 PANTHER O-METHYLTRANSFERASE 441 780 IPR016461 GO:0008168
Pumo7g00572 782 FunFam Caffeic acid 3-O-methyltransferase 1 110 - -
Pumo7g00572 782 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 541 781 IPR029063 -
Pumo7g00572 782 FunFam Caffeic acid O-methyltransferase 111 358 - -
Pumo7g00572 782 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 441 782 IPR016461 GO:0008168
Pumo7g00572 782 Pfam O-methyltransferase domain 135 340 IPR001077 GO:0008171
Pumo7g00572 782 Pfam O-methyltransferase domain 559 763 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00572 Pumo-Chr7 9156222 9170654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00572 425 782 Monolignol Biosynthesis Gene Families AT5G54160 52.646 2.14e-131 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00572 K13066 - dcr:108215819 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00572 7 9156222 9170654 Pumo7g00572 7 9156222 9170654 ECH