Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00571 ATGGCTCCATCATTGGAAATCAATAACAGTGAAGCCACGCACCTCAAACATGTGGAAGAGGACCAAGATGGCATCCTTTTCGCCATGAACATGATGTCTATTATGGTGTATCCATTTGCAGTTAGGACCGCGATTGAGCTTGGGATCTTTGACATCATAGCCAAAGCAGGTGAAGGTGCAAAGCTCTCAGCAGAGGACATAGCAGTTCAACTTGGCACAAAGAACCCTGAAGCACCCACAATGCTTGACCGTGTTCTCAGGTTATTGTCTAGTCACTCCATGCTATCATCATCTCTTGCAGCTGAAGATCATGGCCAAAAGTCTCCCAAGAGGGTCTACAGTCTCACCTATGCCTCCAAGTATTTTGTCACTGATGCTGATGGTATCTCTTTCGGAGCTACCTTGAACTTGCTTCACGACAAGGTCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATCATGGAAGGGGGTGTAGCATTCAACAGGGTTCATGGCATGCACGCATTTGAGTACCCAGCTGTGGATCCTAGGTTCAATGATGTTTTCAACAAAGCAATGTTCAACTTGACCACTATAGTCATGAAGAGGGTCCTTGAGTTCTACGAAGGTTTTAAGAACATTAATAGGCTAGTGGATGTTGGTGGTGGTCTTGGGACCAATCTCAATCTAATCATTTCTAAATATCCCCATCTTCAAGGTGTTAATTTTGACTTGCCACATGTCATAGAGCATGCCCCTAGCTACCCCGGCGTGGAACATGTAGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGACGCCATTTTTATGAAGTCGGTACTCCACGATTGGAGTGATGAACACTGCTTGAAGTTGTTGAAGAATTGCCATAAAGCCATTCCTAGTGATGGAAAAGTGATTGTTGTGGATTTGATGCTTCCCGTTTTGCCCGATAGTACAACTTCTGCCAAGAGTGGTTTCCAAGCTGACCTCTTAATGATGACTCAAAACCCAGGAGGGAAAGAGAGAACCCAGCACGAATTCATGGAATTGGCATTAGGTTCTGGATTCAGTGGCATCACGTACCAACTGAAAGATGCAATTCTAGAAGGAGGTATTCCTTTCAACAGTGTCCATGGCAAACATGTGTTTGAATATTCCGACATGAACTCAAGCTTCAATCAGCTTTTCATGGAAGCAATGACCAACCGTGCGACTTTAATTATGAACAAGATTGTTGAATCCTACAAGGGATTTGAGCGCATCAATAAGCTGGTGGACGTTGGAGGTGGCGTTGGAGTCACTCTTAACATAATCACTACTAAATACCCTCACATTATGGGTATCAATTTTGACTTGCCTCATGTCATAGAACATGCCTCTCCCTATCCTGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGTGTGCCACAAGGAGATGCCATTTTGATGAATTGTGTACTTCACGATTGGAGTGATGAATGGTGCTTGAAGGTGTTGAAGAACTGCTATGCTGCAATTCCTAGAGATGGAAAGGTGATTGTTGTGGAGGGAATTCTTCCATTTGAACCCAAAACAACAGCTTCAGTGAAGAGTATTTCCCAATTTGATGTGCTAATGATGACAACAAACCCAGGAGGGAAGGAGCGAAGTGAAGAGGAATTCATGGCATTGGCAAAAGGTGCTGGATTCAGTGGCATTAGATACACATGCTTTGTCTGTGATGTCTGGGTTATGGAGTTCTTCAAGTAG 1737 0.4421 MAPSLEINNSEATHLKHVEEDQDGILFAMNMMSIMVYPFAVRTAIELGIFDIIAKAGEGAKLSAEDIAVQLGTKNPEAPTMLDRVLRLLSSHSMLSSSLAAEDHGQKSPKRVYSLTYASKYFVTDADGISFGATLNLLHDKVFLESWTELKGAIMEGGVAFNRVHGMHAFEYPAVDPRFNDVFNKAMFNLTTIVMKRVLEFYEGFKNINRLVDVGGGLGTNLNLIISKYPHLQGVNFDLPHVIEHAPSYPGVEHVGGDMFESVPNGDAIFMKSVLHDWSDEHCLKLLKNCHKAIPSDGKVIVVDLMLPVLPDSTTSAKSGFQADLLMMTQNPGGKERTQHEFMELALGSGFSGITYQLKDAILEGGIPFNSVHGKHVFEYSDMNSSFNQLFMEAMTNRATLIMNKIVESYKGFERINKLVDVGGGVGVTLNIITTKYPHIMGINFDLPHVIEHASPYPGVEHVGGDMFESVPQGDAILMNCVLHDWSDEWCLKVLKNCYAAIPRDGKVIVVEGILPFEPKTTASVKSISQFDVLMMTTNPGGKERSEEEFMALAKGAGFSGIRYTCFVCDVWVMEFFK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00571 578 SUPERFAMILY "Winged helix" DNA-binding domain 19 125 IPR036390 -
Pumo7g00571 578 Gene3D Vaccinia Virus protein VP39 123 357 IPR029063 -
Pumo7g00571 578 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 368 578 IPR016461 GO:0008168
Pumo7g00571 578 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Pumo7g00571 578 Pfam O-methyltransferase domain 356 560 IPR001077 GO:0008171
Pumo7g00571 578 FunFam Caffeic acid O-methyltransferase 356 578 - -
Pumo7g00571 578 FunFam Caffeic acid 3-O-methyltransferase 7 122 - -
Pumo7g00571 578 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Pumo7g00571 578 Gene3D - 7 122 IPR036388 -
Pumo7g00571 578 Gene3D Vaccinia Virus protein VP39 388 567 IPR029063 -
Pumo7g00571 578 Gene3D - 375 406 IPR036388 -
Pumo7g00571 578 FunFam Caffeic acid O-methyltransferase 123 355 - -
Pumo7g00571 578 PANTHER O-METHYLTRANSFERASE 29 351 IPR016461 GO:0008168
Pumo7g00571 578 CDD AdoMet_MTases 210 305 - -
Pumo7g00571 578 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 356 576 IPR029063 -
Pumo7g00571 578 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 356 IPR029063 -
Pumo7g00571 578 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00571 Pumo-Chr7 9130561 9136355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00571 356 578 Monolignol Biosynthesis Gene Families AT5G54160 56.502 6.15e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00571 K13066 - gmx:100789402 615.92