Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00568 ATGGACGCATACTCCTCTGGCGAAGAAGTGGTTGTTAAGACGAGAAAACCATATACAATCACAAAGCAAAGAGAGCGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAACTACACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGTCATGCACAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGACAGGCTCTTGATATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAACAATCCTTATCCTCGGAAGACCGGGATTGGTACCGCAACATTACATAGTGGAGCAAAGGATGGAAAACTCAATTTAGTTGAATCTTCACATGTTATCCAAGCACTGGACTTGGAAAAAGAACCACTTCCGGAGAAACATGATTTAGACGAAGGGCCAACAACTGTAAAAGAAAGTAAGGATGAGAACCGCTCAAAAGCATTTACTCTTTTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGTTCAATAACAATGTCAGTGCCACTGGGAAATTCATGCGCCTTCAAGGAGATTACACCTTCAGTGAAAGAGGTAATAGCACGAGATGAAAAAACTGAATCTTTCGTCACTATTGAACTTGAAAATGGGAAGTTGGAGATCAATGATGGAAAACAGACTAATGGCACTAGTAAAGACTCCACGTTAGAGAATTCTGATGCTTTACAAATGAAATTGGTTCAAAATGAGAAAACAGATGGTCTTGATTGTGCATTAACAATAGATGGGATGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGACGGGAACCTTAGAACAAGTACTCAAAATCCATCACAAGATATGTTGTTGCGAGACTCCATGTTTCAGCCAATAGGAGGGGTTAATGGGCAACCAAATGTTTTCACCAATTCAGCTCCATCGAACACAAGTGAAAGTCAAAATAACACTGCACAATCTTCTGTTCGTCAATCATTTCTTCCTTATCTTCCCTTCACACAACACAACCAAGATGATTACCAATCATTTCTTCACATGTCTTCAACATTTTCAAATCTTATTGTCTCTACCTTGATGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTCGCTGCTACATTTTGGCCCTATGCAAATCCAGAAACTTCAGCAGATTCTCCTAGGTGCTCCCAAGGAGGTTTTACAAATAGACAAATTGGTTCCCCTCCAAGCATCGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGATTGCTTCCTTTGTGTGCTCCTCTTCATACTTCTTTTGCCTGTCCTCCTGCATCAGTGACTGCAGTTCCATCAATGAATACCGGTGAAGCACCGGCACTGAAGGCAGAGCAAGAAAAGACTATGCTACAAAATCCTCCTCTTCAAGATCAGATGCTGGATCTAGAATACTCGGAAGCTCAACAAGCTCAACATTCAGATTCTGAGAGCGGAGATGCCAAGTTAAATACTTCATCAAAGGCTGCTGATCATGAGACTAACAAAACAATTTCCGAGCACCTTGATTCCAACAAAACGAAGGGCAGAAAACAGGTTGACCGTTCCTCATGTGGTTCCAACACAGCCTCTAGCAGTGACGTGGAAACTGATGCATTAGAGAAGGATGAGAAAGGGAAGGAAGAGCCTGAAACACCTGATGCTAACCATTTAGCCATTGAGTCTATTAATCGTCGTAAAAGCATTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCACCTCATGCTTTGAAGAATAAGGATCTTCAAATGGACAACACCAATGATAACAAGCAAAACATAGATTACAAAGATGAAGACCTTGACAGCAAGAAATGCAGTTCTAATTACGAAGCAATGCAGAAAATCCCGCCATTTGTAGAAAATAACGAGGGACTGTTAACCATAGGGCTTGGACAAGGAAAGCTTAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCCATGGAGGCCAAGGAAAATAGGGTTGGAGCGAGCAGCAATCAAGGTGAAGAGAAATGTTGTAAGAGAATACGTTTGGAAGGGGAGACTTAG 2217 0.4299 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTGIGTATLHSGAKDGKLNLVESSHVIQALDLEKEPLPEKHDLDEGPTTVKESKDENRSKAFTLFQEVPCSSVSSANKSSITMSVPLGNSCAFKEITPSVKEVIARDEKTESFVTIELENGKLEINDGKQTNGTSKDSTLENSDALQMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTVHVVDGNLRTSTQNPSQDMLLRDSMFQPIGGVNGQPNVFTNSAPSNTSESQNNTAQSSVRQSFLPYLPFTQHNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWPYANPETSADSPRCSQGGFTNRQIGSPPSIAAIAAATVAAATAWWAAHGLLPLCAPLHTSFACPPASVTAVPSMNTGEAPALKAEQEKTMLQNPPLQDQMLDLEYSEAQQAQHSDSESGDAKLNTSSKAADHETNKTISEHLDSNKTKGRKQVDRSSCGSNTASSSDVETDALEKDEKGKEEPETPDANHLAIESINRRKSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNKDLQMDNTNDNKQNIDYKDEDLDSKKCSSNYEAMQKIPPFVENNEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGASSNQGEEKCCKRIRLEGET 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00568 738 Gene3D - 26 73 - -
Pumo7g00568 738 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Pumo7g00568 738 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Pumo7g00568 738 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 503 522 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 551 565 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 86 117 - -
Pumo7g00568 738 SMART sant 23 71 IPR001005 -
Pumo7g00568 738 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Pumo7g00568 738 PANTHER SWI/SNF COMPLEX-RELATED 7 630 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 503 588 - -
Pumo7g00568 738 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 523 550 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 138 163 - -
Pumo7g00568 738 MobiDBLite consensus disorder prediction 566 585 - -
Pumo7g00568 738 CDD SANT 26 69 IPR001005 -
Pumo7g00568 738 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Pumo7g00568 738 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00568 Pumo-Chr7 8989491 9000171 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo7g00568 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00568 K12133 - gmx:100101859 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00568 7 8989491 9000171 Pumo7g00568 7 8989491 9000171 ECH