LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo7g00559	ATGGTTGGTGCAAAGACACAGTTAACATTGGAAGAATCTGTCTTGTGGTGCCACTGGCAATGTGAAAGCCTATCATGGCTTCCTCGTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACACCAAGGCAAGTTTATTTTCTCCACGTGCCCATTACTTGTAATAATTTCCCAGAAGAATGGATCACTCTTGGGAACCACAAAAGCTTCTTTCCTTAGTGGGAGGAAACTGAAGGTGAACAGTTTTACAGCACCAGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGAGCCTGATAGGCCTCTGTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGGTTTGATCCTCTTGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAATGTCCAAGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGAGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTGAACACCCCCTCTTGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTCTTCATAGTTGAACTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGGTGGGCTGACATCATCAAGCCAGGTTGTGTCAACACTGATCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGCTGGGGAAGTGGTTCTCCTGAAAAGATCAAGGAGTTGAGAACCAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGGGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCCGATCCTGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA	927	0.4962	MVGAKTQLTLEESVLWCHWQCESLSWLPRVLPLPLQLLPSPHQGKFIFSTCPLLVIISQKNGSLLGTTKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo7g00559	308	Gene3D	Chlorophyll a/b binding protein domain	113	298	-	-
	Pumo7g00559	308	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	91	306	IPR001344	GO:0009765\|GO:0016020
	Pumo7g00559	308	SUPERFAMILY	Chlorophyll a-b binding protein	100	306	-	-
	Pumo7g00559	308	Pfam	Chlorophyll A-B binding protein	112	278	IPR022796	-
	Pumo7g00559	308	FunFam	Chlorophyll a-b binding protein, chloroplastic	113	298	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo7g00559	Pumo-Chr7	8663258	8665433	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo7g00559	84	308	Chloroplast and Mitochondria Gene Families	AT3G61470	88.053	2.43e-147	412

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo7g00559	K08908		-	gmx:100784089	531.176