Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00541 ATGACCAACCCAAAACTAGGCTATGCCGGAATCTCTGATTCCGGCAACAGCAACCACATTTCCCTCTCCAAGAGAAACCACAAGAAGCTCCTCCTCTCCCTCTTGGCCACCCTGGTGGTGGCGGCCTCCGTGGTGGCCGTGGTGGCGGGAGTAAAAAACAAAACCAAGAACAACTCAAACTCTGACACCAGCAGCACCTCCCTCTCCCTCTCCCACCACTCCCACGCGATGATCAAGAGCGCGTGCAGCTCCACATTCTACCCGGAGCTCTGCTTCTCCGCCATCTCCTCGGAGGCCAACGTCACGCACAAAGTCACCACCCACCGCGATGTCATCCAGCTCTCCCTAAACATCACCTTCCGCGCGGTGGAGCACAACTACTTCACCGTGAAGAAGCTCCTCGCCAAACACGACCTTACGAAACGCGAGAAGACCGCGCTCCACGACTGCCTCGAGACCATAGACGAAACCCTCGACGAACTCCGAGAGGCTCAGCACGACCTCCAACTCTACCCTAACAAGAAAACTCTCTACCAGCACGCCGACGATCTCAAAACTCTCATCAGCGCCGCCATAACGAACCAGGTCACGTGCCTCGACGGGTTCTCTCACGATGATGCGGATAAGCACGTGCGGAAGGCGCTAGAGGAAGGACAGGTGCACGTGGAACACATGTGCAGCAACGCACTGGCCATGACCAAAAACATGACCGACACTGACATTGCCAACTACGAATACAAAATGAAGGTGGAGAATAATAGTAAAAATGGTAATAATTATAACAATAGGAAGCTGTTGGTGGTGGAGAATGATAATGTTGAGTGGCCGGAGTGGGTTTCGGCGGCGGATAGGCGGCTGCTGCAGGAGACGACGGTGACTGCGGATGTGGTGGTGGCGGCGGACGGAAGCGGGGACTTTAAGACGGTGTCGGAGGCGGTGGATGCGGCTCCGTTGAAGAGTAGCAAGAGGTTTGTGATAAGGATTAAGGCTGGGGTGTATAGAGAGAACGTTGAGGTGCCTAAGAAGAAGACCAATATCATGTTCTTGGGTGATGGAAAAACCAACACTATCATCACTGCTAGCAGAAATGTCGTTGATGGTAGCACCACTTTCCACTCTGCCACCGTCGCTGTGGTGGGTGGAAATTTCTTGGCCAGGGACATAACATTCCAAAACACAGCGGGTCCCTCAAAGCACCAAGCTGTGGCCCTAAGAGTAGGTGGGGACCTCTCAGCATTCTTCAACTGTGACATCCTAGCATTCCAAGACACCCTTTATGTCCACAACAATCGTCAATTCTTTGTGAAGTGCCTAATTGCTGGGACAGTGGATTTCATCTTTGGTAACTCAGCTGTGGTGTTCCAAGACTGTGACATCCATGCTAGGCTTCCTAACTCGGGCCAGAAGAACATGGTCACGGCCCAAGGAAGAGTTGACCCTAACCAAAATACTGGCATTGTGATCCAGAAGTGTAGGATTGGTGCCACTAAGGACTTGGAGCCTCAGAAGAAGAACTTCAAGACTTATCTTGGAAGGCCTTGGAAGGAGTACTCTAGGACTGTGATCATGCAGAGTAGTATAAGTGATGTGATTGACCCAGTTGGGTGGCATGAGTGGAGTGGGAACTTTGCATTGAGCACTTTGGTTTATAGGGAGTATCAGAACACTGGGCCTGGTGCTGGAACTTCAAATAGGGTCACTTGGAAAGGGTTTAAGGTCATCACTGATGATGCTGAGGCCAGGGGTTTTACTCCTGGAAGCTTCATTGGGGGCTCTAGCTGGTTGGGCTCTACTGGCTTTCCTTTCTCTCTTGGGTTGTAA 1821 0.5189 MTNPKLGYAGISDSGNSNHISLSKRNHKKLLLSLLATLVVAASVVAVVAGVKNKTKNNSNSDTSSTSLSLSHHSHAMIKSACSSTFYPELCFSAISSEANVTHKVTTHRDVIQLSLNITFRAVEHNYFTVKKLLAKHDLTKREKTALHDCLETIDETLDELREAQHDLQLYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHDDADKHVRKALEEGQVHVEHMCSNALAMTKNMTDTDIANYEYKMKVENNSKNGNNYNNRKLLVVENDNVEWPEWVSAADRRLLQETTVTADVVVAADGSGDFKTVSEAVDAAPLKSSKRFVIRIKAGVYRENVEVPKKKTNIMFLGDGKTNTIITASRNVVDGSTTFHSATVAVVGGNFLARDITFQNTAGPSKHQAVALRVGGDLSAFFNCDILAFQDTLYVHNNRQFFVKCLIAGTVDFIFGNSAVVFQDCDIHARLPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEPQKKNFKTYLGRPWKEYSRTVIMQSSISDVIDPVGWHEWSGNFALSTLVYREYQNTGPGAGTSNRVTWKGFKVITDDAEARGFTPGSFIGGSSWLGSTGFPFSLGL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00541 606 Pfam Pectinesterase 295 591 IPR000070 GO:0030599|GO:0042545
Pumo7g00541 606 Pfam Plant invertase/pectin methylesterase inhibitor 77 232 IPR006501 GO:0004857
Pumo7g00541 606 NCBIfam pectinesterase inhibitor domain 67 236 IPR006501 GO:0004857
Pumo7g00541 606 ProSitePatterns Pectinesterase signature 2. 439 448 IPR033131 -
Pumo7g00541 606 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 237 IPR035513 -
Pumo7g00541 606 FunFam Pectinesterase 289 606 - -
Pumo7g00541 606 Gene3D - 289 606 IPR012334 -
Pumo7g00541 606 ProSitePatterns Pectinesterase signature 1. 320 339 IPR018040 -
Pumo7g00541 606 Coils Coil 147 167 - -
Pumo7g00541 606 SUPERFAMILY Pectin lyase-like 291 605 IPR011050 -
Pumo7g00541 606 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 237 IPR035513 -
Pumo7g00541 606 PANTHER PECTINESTERASE 43 596 - -
Pumo7g00541 606 CDD PMEI-like_3 80 237 - -
Pumo7g00541 606 FunFam Pectinesterase 74 237 - -
Pumo7g00541 606 SMART PMEI_2 73 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00541 Pumo-Chr7 8469166 8475152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00541 24 606 Carbohydrate Esterase AT3G14310 69.322 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00541 K01051 - gmx:100776623 1024.62