Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00521 ATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCGGCGGGTCCCGCCGGCGGGGCCCGGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGCCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCAAGGATGACTCTGAAATCGAGGACGAGGACGACGATGAAGAGGAGGAGGAGTTGATGGGGCTTGATGTGAAGAAGAAGCCCTTTGGTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCATCTCTCTCGTGGAACAAAAACTGTGAAATCTGCTGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATAGGGGCATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTTCCTCAAAACGCGTCAAGGCAAATCCAGAGGCGCAGCCAATGAAGGAAAATCTCAACTCTGTGAAGCCAAAAATGAACCAGATGTTCAATTTTGGTGACAATCTGGAGGGCTACTACAGCCCTATAGAACAGGTGGAACAGAAACCACTTGTTAACCAGTATGCTAACCCTGCCCTATTTGCTGGAAATGCAGTTCAAGTCCCACCTGTTACTCCACCTGCTGATGTTGCTGCTTACTTCAGTTCTGAGCATTCGAGCAATTCGTTTGATTATTCTGACCTTGGATGGGGTGAACAAGTCCCAAAGACTCCTGAGATCTCATCCATGCTTGCTGCTCCTTTGGAGAATGAATCTCAGTTTGTGCAGGGTGCTGATCAGACTCAGAAGAAGAACAACTCACAGGATGGTATGCCTGTGCAGGATGATTCTGCAAAGACCCTATCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTTTCTTGATGAACAGTGGGCTGATGCTACATTGGCATCTTTGCTCAGCGGAGATGCAACTCAGGATGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGA 1173 0.5055 MCGGAIISDFIPAGPAGGARRVTADILWPNLRKRFSKPLLDDDFEAGFREFKDDSEIEDEDDDEEEEELMGLDVKKKPFGGFSRSNNKAASKHLSRGTKTVKSAESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGASSKRVKANPEAQPMKENLNSVKPKMNQMFNFGDNLEGYYSPIEQVEQKPLVNQYANPALFAGNAVQVPPVTPPADVAAYFSSEHSSNSFDYSDLGWGEQVPKTPEISSMLAAPLENESQFVQGADQTQKKNNSQDGMPVQDDSAKTLSEELADIESQLKFFETPFLDEQWADATLASLLSGDATQDAGNPMNLWSFDDLPSMAGVF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00521 390 MobiDBLite consensus disorder prediction 305 330 - -
Pumo7g00521 390 MobiDBLite consensus disorder prediction 305 325 - -
Pumo7g00521 390 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 MobiDBLite consensus disorder prediction 84 104 - -
Pumo7g00521 390 Gene3D AP2/ERF domain 120 179 IPR036955 GO:0003700|GO:0006355
Pumo7g00521 390 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 PANTHER DNA-BINDING DOMAIN 88 332 IPR044808 GO:0003700|GO:0009873
Pumo7g00521 390 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 MobiDBLite consensus disorder prediction 76 125 - -
Pumo7g00521 390 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Pumo7g00521 390 MobiDBLite consensus disorder prediction 51 70 - -
Pumo7g00521 390 SUPERFAMILY DNA-binding domain 121 179 IPR016177 GO:0003677
Pumo7g00521 390 MobiDBLite consensus disorder prediction 54 69 - -
Pumo7g00521 390 MobiDBLite consensus disorder prediction 175 194 - -
Pumo7g00521 390 FunFam Ethylene-responsive transcription factor 2 120 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00521 Pumo-Chr7 8237947 8241555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00521 1 386 AP2-EREBP Transcription Factor Family AT3G14230 43.780 2.01e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo7g00521 AP2 4.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00521 K09286 - gmx:100818646 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00521 7 8237947 8241555 Pumo7g00521 7 8237947 8241555 ECH