Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00505 ATGGACGACGACGACGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGCGTCATCGCCGCGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCCACCACCGCCGAATAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGGAACGGCGGCGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGAGATCGTGAGCGGCAGAGAGGATTACACGAAGGCGTCGAAGACCGATATTCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTACGACCGATTGGACCAATTAATCGGTCCTAGCGCCAAGATCCCCGGCACCGCCGGCACCAGCGCTGCCGGAAACAGTAATTTACAACCGCAGAAAGTTCCGTTAGGGATTCCGGTCGGCGTTCGCGGCAGCGCGAATCAGTTTCACCATCCTCAAAAACCGCCGCAGCAGCAACAGGCGCATCCGCAACCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGGGGAGTCCGATTCGGAGGAGCGCGACGCTTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGGGTTTCGAGAGGAAGAGGCCGAGAATGATGAGCTCAAAAACCGCGAAAGGAAGCGAAGAAAGACGGAAGACGAAGGGTTGGGGAAGCGCGGTGAGGGAATTGACGCAGGCGATTCTGAAATTTGGCGAGGCTTATGAGCAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACACAGTTGGAGATTTCGCAGCTCAAGCTTGGAAGGAAAGGTGCTAACCCTAGCAACAATCACCATAGCACCACCAACAATAACAATAACAACAACAATCATAACAATAATAGTGACAGTGAATGA 1107 0.5727 MDDDDEIQSHPSPASGSPASSPRANGRITVTVAAPAPPPPPNSLALALPIQQPAKGNGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKASKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLDQLIGPSAKIPGTAGTSAAGNSNLQPQKVPLGIPVGVRGSANQFHHPQKPPQQQQAHPQPVPLKNQKIQFRRRGPPGESDSEERDASSPASSDSFPPEGFERKRPRMMSSKTAKGSEERRKTKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANPSNNHHSTTNNNNNNNNHNNNSDSE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00505 368 Gene3D - 65 130 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 10 27 - -
Pumo7g00505 368 FunFam trihelix transcription factor ASIL2 65 130 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 154 277 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 194 211 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 246 275 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 1 63 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 220 236 - -
Pumo7g00505 368 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 27 337 IPR044823 -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 163 177 - -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 336 368 - -
Pumo7g00505 368 Pfam Myb/SANT-like DNA-binding domain 62 152 IPR044822 -
Pumo7g00505 368 MobiDBLite consensus disorder prediction 339 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00505 Pumo-Chr7 8027595 8029221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00505 1 349 Trihelix Transcription Factor Family AT3G14180 48.276 6.61e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo7g00505 Myb_DNA-bind_4 1.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00505 - - gmx:100812599 547.74