Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00485 ATGTCAAGCTTCCCCAACACGGTGGCGGAAGGCCGGAGGTCCGGCAAGGCACCGGAAAAATCCACTTTTTCTCAGACTTGCAGCCTCTTGAGCCAGTTCTTGAAGGAGAAACGTGCTTCTGCTGATTCCACCCTTGGAATTGGTGGCAAAATGGAACCTAAAGCTAGTACCAAGGATTTGTTAGGCAGCCTGCAAAACTCAGATGGGGCTTTGAAACTAAGCGCTTCTGCCATGGAATTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTGATGTTAGGTCACTGGGACCTGAATCTCCCCAATTGACAATATTCTATGCTGGAAAAATGTTGGTATTTGATGCTTTTCCGCCAGAGAATGCGACGGAGGTCATGGAGTTGGCCACCAAGTTGGCCTCGGACATTTCCAGCACCGAAGAAATTCCCCCAAGTGCTCCGGTTACCACTGAGAAATTGGCTGTGTCCAAAGTGCCTCAAACAAACACTTCCTCAGAAACCCCTAAGCCAGGAAGCCAAGGGGTTGGTTCAGATATGAGGTACCCAAGGAGAGCTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTTAATGCTAGAGGGCCATACCAAATTAACAACCACAAGCCAGAAGGAAGCAGTTCAGGGGGTGAACCTGAAGATCAGTGTTCCAAACAGTTTGACCTTAACTTGTAG 705 0.4766 MSSFPNTVAEGRRSGKAPEKSTFSQTCSLLSQFLKEKRASADSTLGIGGKMEPKASTKDLLGSLQNSDGALKLSASAMEFLPQLVENPCIKKSDVRSLGPESPQLTIFYAGKMLVFDAFPPENATEVMELATKLASDISSTEEIPPSAPVTTEKLAVSKVPQTNTSSETPKPGSQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQINNHKPEGSSSGGEPEDQCSKQFDLNL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00485 234 Pfam Jas motif 185 207 IPR018467 -
Pumo7g00485 234 Pfam tify domain 100 131 IPR010399 -
Pumo7g00485 234 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 217 IPR040390 -
Pumo7g00485 234 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Pumo7g00485 234 MobiDBLite consensus disorder prediction 210 234 - -
Pumo7g00485 234 MobiDBLite consensus disorder prediction 156 174 - -
Pumo7g00485 234 SMART tify_2 98 133 IPR010399 -
Pumo7g00485 234 MobiDBLite consensus disorder prediction 137 185 - -
Pumo7g00485 234 MobiDBLite consensus disorder prediction 200 234 - -
Pumo7g00485 234 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00485 Pumo-Chr7 7796939 7799827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00485 8 208 Tify Gene Family AT1G19180 33.766 1.81e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pumo7g00485 tify 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00485 K13464 - gmx:100778559 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00485 7 7796939 7799827 Pumo7g00485 7 7796939 7799827 ECH