Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00484 ATGGCCATAGCTCCTGCAATAATCCTCCAGCCAACTCTCATCATCATCGTCACTTTGCCTGTGATATATTCCATGACAGAAGCTGAAGCTTTGGTTAGTCTCAAAAGCTCCTTCTCCAATGCCGAACTTTTGGACAGTTGGGTGGCTGGTTCTGCACCTTGTAGTGAAGAGGACCAATGGGAAGGTGTTGTTTGCAACAATGGGGTTGTCACGGGGCTTCGCCTTGGAGGAATGGGGTTAGTAGGGGAGATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGAACTATAAGCCTCAACAACAATTCTTTCTCAGGTTCCATGCCTGAGTTCAACCGAATTGGGTTCTTGAAAGCCTTGTATTTGCAAGGAAACAAGTTCTCTGGGGACATTCCTATGGAATATTTTCAGAGAATGAGGTCTTTGAAGAAAGTGTGGCTTTCTGATAACCAATTCACTGGGAATATTCCACCATCATTGGCTGATATTCCTCAGCTGATGGAGTTGCACCTTGAAAACAACCAGTTTAGTGGAAACATTCCTGATCTGAGTAACCCATCATTGGTGAAATTTGATGTTTCCAACAACAAATTGGAAGGTGGAATCCCAGCTGGTTTGTTGAGATTCAATGAGAGTTCCTTTGCAGGGAATTCTGGTCTTTGTGGTGAGAAGTTAGGAAAATCATGTGACAAGGCAATGGAACCAAGTTCTAGTCCCATTGGTGATGATGCAGAAGATAATGTTGGTGATAATGTGCCTTCTGTGCCACATAGTAGTAGCGCATTTGAGGTTGCTGGCATTATAGTGGCGAGTGTGTTTCTTGTCTCACTAGTTGTGTTTTTAATTGTGAGATCAAGGAGAAAGAAGGAGGAGGAGAATTTTGATATGCTTGGACAAGATGTTAATGAAGGTGCAGTGGAAGTTCAAGTGACTGCACCAGTGAAAAGGGATTTGGATATATCTTCAACTGCAAGTACACCAATGAAAAAAACAGCGTCCAGAAGGGTATCTATATCTGGTCAAAGTAAAAACGTTGGAGAGCTTGTGATGGTGAATGATGAGAAGGGCGTGTTTGGGTTGCCGGATTTGATGAGGGCAGCTGCGGAAGTGCTGGGAAATGGAAGCTTTGGATCTTCTTACAAAGCCGTGATGGCTAATGGAGTGGCAGTGGTGGTGAAAAGGACTAGAGAGATGAATGTTCTGGAAAAAGATGATTTTGATGCAGAGATGAGGAAGCTAACAAAGCTTAAACACTGGAACATATTGACCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCAAGAGGCAGTCTACTGTTTTCACTGCATGGTGATAGGGGACCATCTCATGCTGAGTTGGATTGGCCTGCTCGTATGAAGATTGTACGTGGAATTGCTGAAGGGATGCGTTATCTTTACACAGAACTTGCTTCCTCCGATCTCCCACATGGCAATCTCAAGTCCAGCAATGTTCTCCTCGGACCAGACAATGAACCAATGCTTGTAGATTACGGGTTTGGCCACATGGTTAACCCTTCAAGCGTTGCACACACACTATTTGCTTACAAGGCACCAGAGGCAGCACAACATGGCCAAGTTTCGCGTAGTTGTGATGTTTACTGTCTTGGGGTTGTCATAATTGAGATACTCACAGGGAAGTTCCCTTGTCAATATCTCAGCAATGGAAAGGGTGGAACTGATGTGGTGCAATGGGTTGAAACTGCAATCTCTGAGGGAAGGGAATCGGAAGTGCTTGATCCAGAGATTGCAAGCTCTAGGAATTGGCTTGGTGAGATGGAGCAACTCCTCCACATTGGTGCTGCTTGCACTGAGAGCAACCCTCAGCGGCGGTTAGACATGGGGGAAGCCATTAGAAGGATACAAGAGATCAAAACCGAGGGTGGACAAGAATCAAGAACAATAGAGGTCTTGCCATCTCTTACAGATGGCTATGCAGATTCTCAAGTATTTGACAACCAAGGGCATGGTGACCACTCACAGAGAAGACTACATGGAACAAACAGCTTTGAAAGCCGGGATAGCATTGAATTTGGCAGCTCCTAG 2091 0.4476 MAIAPAIILQPTLIIIVTLPVIYSMTEAEALVSLKSSFSNAELLDSWVAGSAPCSEEDQWEGVVCNNGVVTGLRLGGMGLVGEIHVDPLLELKGLRTISLNNNSFSGSMPEFNRIGFLKALYLQGNKFSGDIPMEYFQRMRSLKKVWLSDNQFTGNIPPSLADIPQLMELHLENNQFSGNIPDLSNPSLVKFDVSNNKLEGGIPAGLLRFNESSFAGNSGLCGEKLGKSCDKAMEPSSSPIGDDAEDNVGDNVPSVPHSSSAFEVAGIIVASVFLVSLVVFLIVRSRRKKEEENFDMLGQDVNEGAVEVQVTAPVKRDLDISSTASTPMKKTASRRVSISGQSKNVGELVMVNDEKGVFGLPDLMRAAAEVLGNGSFGSSYKAVMANGVAVVVKRTREMNVLEKDDFDAEMRKLTKLKHWNILTPLAYHFRKDEKLVISEYVPRGSLLFSLHGDRGPSHAELDWPARMKIVRGIAEGMRYLYTELASSDLPHGNLKSSNVLLGPDNEPMLVDYGFGHMVNPSSVAHTLFAYKAPEAAQHGQVSRSCDVYCLGVVIIEILTGKFPCQYLSNGKGGTDVVQWVETAISEGRESEVLDPEIASSRNWLGEMEQLLHIGAACTESNPQRRLDMGEAIRRIQEIKTEGGQESRTIEVLPSLTDGYADSQVFDNQGHGDHSQRRLHGTNSFESRDSIEFGSS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00484 696 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pumo7g00484 696 Gene3D Phosphorylase Kinase; domain 1 335 441 - -
Pumo7g00484 696 MobiDBLite consensus disorder prediction 671 685 - -
Pumo7g00484 696 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Pumo7g00484 696 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pumo7g00484 696 MobiDBLite consensus disorder prediction 668 696 - -
Pumo7g00484 696 SUPERFAMILY Protein kinase-like (PK-like) 370 635 IPR011009 -
Pumo7g00484 696 Gene3D Transferase(Phosphotransferase) domain 1 442 653 - -
Pumo7g00484 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 642 IPR046959 -
Pumo7g00484 696 Pfam Protein kinase domain 370 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00484 696 Gene3D Ribonuclease Inhibitor 188 226 IPR032675 -
Pumo7g00484 696 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 86 181 - -
Pumo7g00484 696 SUPERFAMILY L domain-like 28 209 - -
Pumo7g00484 696 ProSiteProfiles Protein kinase domain profile. 366 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00484 Pumo-Chr7 7751650 7754230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00484 13 639 Receptor kinase-like Gene Family AT3G42880 45.781 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo7g00484 Pkinase 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00484 - - gmx:100809208 1146.72