Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00466 ATGCCTTCGAAGAGGCTTCAATGGAGATCCTTAGTACTGGGTTGTTTCAAGGCCAAGAACCAACAATCCTTGGAATCTCCAAACATAGTTTCTAAGAAGTCATCTTCAAGTAGAATCTTCCTCTCTGATTTAAGCCTAAGCGATTATTCATCAGTTTCTATCATGAGTGATTTATCCAATTCTCTTGTGGGATCAAATCTTCGTATTTTCACCTACCAGGAGCTCTCAGAGATTACACACAACTTCAGCAAATCCAACATTCTTGGGGAAGGTGGGTTTGGGAAGGTGTATAAAGGGTTTATTGATGACAATCTTAAGCGTGGATTGAAAGCTCAGACTGTGGCAGTTAAGGCCTTAAACTTGGATGGAAAACAAGGCCACAGAGAGTGGTTGGCTGAAGTTATCTTTCTGGGGCAATTGAAACATCGCCATCTGGTTAACTTAATTGGCTACTGCTGTGAAGATGAGCACAGGCTTCTTGTGTATGAATACATGGAGAGGGGCAATCTAGAGGAGAAGCTTTTCAAAGGTTATTTAGCAGCCTTGCCTTGGCTAACAAGAATCAAAATAGCAATTGGGGCAGCAAAGGGACTAATGTTTCTTCATGAAGAAGAGAAACCAGTCATATATAGAGATATCAAGGCCTCAAACATTCTATTGGACGCTGACTACAATGCCAAGCTCTCGGATTTCGGTTTAGCAATAGATGGACCAGAAAAAAACCAAACACACATCACAACTCGTGTGATGGGTACACATGGTTATGCTGCCCCTGAGTACATCATGACAGGCCATTTGACAACCATGAGTGATGTATATAGCTTTGGAGTTGTTCTCCTAGAGCTTCTCACAGGAAAGAAATCAGTGGACAAAAAAAGACCCACCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCTTTGTTGAAGGATTCCCACAAACTAGAAAGAATAATGGACACAAGACTTGAGGATCAGTTCTCAACAGAAGGGGCTAGAAAATTTGCAGCCTTGGCTTATCAATGTCTGAGCCATCATGCAAAGGCTAGGCCCACCATGAGAACCGTGGTTAGGACCCTAGAGCCTCTCTTGGAACTGAAAGATATCCCAGTTGGCCCATTTGTCTATGTGGTGCCCAGTGAAGAAGACTCAACCAAAGTGAATGAAAAACTAACAGAAAATGACCATGCTGAGATCAACCAAGGTGAGTTAAAATTAAAAGCCAATGAAGAAGAAAAGGAAGAGAAAAAAGAAAAGGGTCACCACCGGGCACGAAAAAGTCGTCGCAATAGACGTCGTGTTAAGCCATTGAGGACTCGAGCTGTTTACTCTGACACTGCTCTGTATAAAACTCTTGGTACAAATCTGTACTCTCCAAAACAAGCACAATAA 1389 0.4255 MPSKRLQWRSLVLGCFKAKNQQSLESPNIVSKKSSSSRIFLSDLSLSDYSSVSIMSDLSNSLVGSNLRIFTYQELSEITHNFSKSNILGEGGFGKVYKGFIDDNLKRGLKAQTVAVKALNLDGKQGHREWLAEVIFLGQLKHRHLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYLAALPWLTRIKIAIGAAKGLMFLHEEEKPVIYRDIKASNILLDADYNAKLSDFGLAIDGPEKNQTHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKKSVDKKRPTREQDLVEWARPLLKDSHKLERIMDTRLEDQFSTEGARKFAALAYQCLSHHAKARPTMRTVVRTLEPLLELKDIPVGPFVYVVPSEEDSTKVNEKLTENDHAEINQGELKLKANEEEKEEKKEKGHHRARKSRRNRRRVKPLRTRAVYSDTALYKTLGTNLYSPKQAQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00466 462 SMART serkin_6 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00466 462 MobiDBLite consensus disorder prediction 405 439 - -
Pumo7g00466 462 CDD STKc_IRAK 88 362 - -
Pumo7g00466 462 FunFam Serine/threonine-protein kinase BIK1 49 164 - -
Pumo7g00466 462 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00466 462 Coils Coil 393 418 - -
Pumo7g00466 462 Pfam Protein tyrosine and serine/threonine kinase 85 359 IPR001245 GO:0004672|GO:0006468
Pumo7g00466 462 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Pumo7g00466 462 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Pumo7g00466 462 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 165 368 - -
Pumo7g00466 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pumo7g00466 462 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Pumo7g00466 462 PANTHER OS01G0588500 PROTEIN-RELATED 36 362 - -
Pumo7g00466 462 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Pumo7g00466 462 MobiDBLite consensus disorder prediction 419 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00466 Pumo-Chr7 7472451 7474821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00466 68 391 Glycoside Hydrolase AT3G07070 48.171 2.31e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo7g00466 PK_Tyr_Ser-Thr 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00466 - - gmx:100790454 811.216