Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00462 ATGATCATGGAACCAAATCCAACATCAGATCACAGTATGGACTGGTTTGATCAAGGTTCTGTCTCTTTCTTTCCACCATTCTTAGATTATCCATATAACTCTAGTGACATCCAAGAGTATCATCAGTTGTGGGATCAAGACATAACCAGCCACTACCAAACTGACACCAATACCAGTTCCCCCAATGCCACCAACATTGCTACTAGCATAGCACCCCTTGAGCCTTGTGATTCTAACAACCTACCACTTTCTGATTTGCCCAAGAAAAGAAGTGCCACTGATGAGTCTAGTCCCAAACCACCACAAAACCACAAGCACAAGAAAATCAAGAGCAAGCCAACGAATAATGAAGCGGATAATGGAGATGCAGAAGGGACAACAACAGTTAGAAAATCTGGTGGGAACAAGAAAGGTGCTGCTAAGGGTGTAGGAAATAACTGCAATAACAAGGATGGTAGGTGGGCTGAACAGTTGCTCAACCCTTGTGCTGCAGCCATAACTGGTGGAAACCTGAACCGTGTGCAACACCTCTTGTATGTTCTCCATGAGTTAGCATCACCTACTGGTGATGCTAACCACAGGCTTGCAGCACATGGTCTTAAAGCACTGACACACCATCTATCTTCTTCTCCAACTTCTACCTCTTCAGGGTCCATAACTTTTGCATCTACCGAGCCACGGTTCTTCCAAAAGACACTGCTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAACAACATAGCAAATGCTTCTATCCTTCAAGTTCTTGGTGAAGACCATGATAATTCACGCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGCATGCAATGGCCAACGTTTCTAGAGGCCTTGAGTCGCAGACCTGGTGGACCTCCTCCATTGGTTCGCCTCACGGTGGTCACTGCTTCCTCCACTGAAATTGACACCCCATTTACTATAGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCAATGAATGTTAATTTGCAGATAAACAAGCTAGATAATTGTCCATTGCATACTCTGAATGCTCAGAGTGTTGACACCTCCCCGGATGAAATCTTTGTTGTGTGCGCACAGTTTAGGTTGCATCAGTTAAATCACAGTACCCCTGATGAAAGAAGTGAGTTTCTGAAAGTGTTGAGGAACATGGAGCCCAAAGGGGTGATACTAAGTGACAACAACATGGGATGTTGTTGCAATTGTTGTGGGGATTTTGCCACTGGATTCTCACGAAGGGTTGAGTACTTGTGGAGGGTTTTGGACTCAACAAGCGCGGCATTCAAGGGTCGTGAGAGTGATGAAAGGAGAGTGATGGAAGGTGAGGCTGCAAAGGCATTGACAAACCAGCGGGAGATGAATGAAGGGAAGGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGGGGGAAGTATTTGGAGAGGATGCAATAGATGGAGGTCGAGCTTTGCTGAGGAAGTATGATAATAATTGGGAGATGAAAGTGGAAGATGACAATAGAAGTGTTGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGAACTGATCAGAGCTCAACATTTACATCATGA 1629 0.4506 MIMEPNPTSDHSMDWFDQGSVSFFPPFLDYPYNSSDIQEYHQLWDQDITSHYQTDTNTSSPNATNIATSIAPLEPCDSNNLPLSDLPKKRSATDESSPKPPQNHKHKKIKSKPTNNEADNGDAEGTTTVRKSGGNKKGAAKGVGNNCNNKDGRWAEQLLNPCAAAITGGNLNRVQHLLYVLHELASPTGDANHRLAAHGLKALTHHLSSSPTSTSSGSITFASTEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGEDHDNSRTLHILDIGVSHGMQWPTFLEALSRRPGGPPPLVRLTVVTASSTEIDTPFTIGPPGDNFSSRLLGFAQSMNVNLQINKLDNCPLHTLNAQSVDTSPDEIFVVCAQFRLHQLNHSTPDERSEFLKVLRNMEPKGVILSDNNMGCCCNCCGDFATGFSRRVEYLWRVLDSTSAAFKGRESDERRVMEGEAAKALTNQREMNEGKEKWCERMKEAGFVGEVFGEDAIDGGRALLRKYDNNWEMKVEDDNRSVGLWWKGQPVSFCSLWKLDGTDQSSTFTS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00462 542 MobiDBLite consensus disorder prediction 71 148 - -
Pumo7g00462 542 Pfam GRAS domain family 156 530 IPR005202 -
Pumo7g00462 542 MobiDBLite consensus disorder prediction 118 133 - -
Pumo7g00462 542 ProSiteProfiles GRAS family profile. 146 530 IPR005202 -
Pumo7g00462 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 123 518 IPR005202 -
Pumo7g00462 542 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00462 Pumo-Chr7 7425336 7427377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00462 1 530 GRAS Transcription Factor Family AT3G13840 50.459 6.42e-169 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo7g00462 GRAS 6.3e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00462 - - gmx:100806550 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00462 7 7425336 7427377 Pumo7g00462 7 7425336 7427377 ECH
Pumo7g00462 7 7425336 7427377 Pumo4g04100 4 81692027 81694075 PCT