Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00453 ATGGTTATAGTAATAGCTGAAGGTGCAGGTCAGGTGCTTATTTCAGAAAGCCTATCTGCTACAAATCAGCAGGATGCTTCTGGCAACAAGTTACTTCAAGATGTTGGTCTGTGGTTATCCCAAAAGATTAAGCCTAAGCAAATCCAGGAGATTAAGGACTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTCAAGATCAAGAGAAGCAGAGATGTCGTTAAGTTAAAAGGTCCAATGCTCCAAGTACCTCTACACACTTCATGTGTTTGA 276 0.4312 MVIVIAEGAGQVLISESLSATNQQDASGNKLLQDVGLWLSQKIKPKQIQEIKDFLLTARRKDARSVKIKRSRDVVKLKGPMLQVPLHTSCV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00453 91 PANTHER 60S RIBOSOMAL PROTEIN L38 45 78 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pumo7g00453 91 Gene3D - 44 80 IPR038464 -
Pumo7g00453 91 Pfam Ribosomal L38e protein family 45 78 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00453 Pumo-Chr7 7228666 7229815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00453 45 91 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 72.340 6.85e-16 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00453 K00850 - gmx:100782166 71.6329