Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo7g00452 | ATGATGAGTGCAAGTGCAAGAAATAGGTCTCCTTTCACACCAACTCAGTGGCAAGAACTTGAGCAACAAGCTCTTGTTTTTAAGTACATGGTTACAGGAACACCTATCCCACCAGATCTCATATACTCTATTAAAAGAAGCCTAGACACTTCAATTTCTTCAAGGCTCTTCCCACATCATCCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAACAACAAGCACCGCCACAAACACCTCCCAAACAATCCCATCTTATACCAGAAACCTTTCCTTGACCAACAACCCCAACAACATAACCTCACCCTCCTCTTTCCCTTTCTCTCCTTTGCCCTCTTCTATGCCATGTGAGTCCCAACCTTTTTCCCAATCCTACCAAAACTCTTCTCTCAATCCCTTCTTCTACTCCCAATCAATCTCCTCTAGACCCCCAGATTCTGATTTTCCACCTCAAGATGCCACCACCCACCAGCTATTCATGGACTCTGGCTCTTATTCTCATGATCAAAAGGATTATAGGCATGTTCATGGAATAAGGGAAGATGTGGATGAGAGAGCTTTCTTCCCAGAAGCATCAGGATCAGCTAGGAGCTACACTGACTCATATCAACAACTATCAATGAGCTCCTACAAGTCCTATTCAAACTCCAACTTTCAGAACATCAATGATAGCACCAACCCAAGACAGCAAGAGCAGCAACAGCACTGCTTTGTTTTGGGGACAGACTTCAAATCAACAAGACCAAACAAAGAGAAAGAAGCTGAGACAACAAGTCAGAGACCCCTTCACCGTTTCTTTGGGGAGTGGCCACCAAAGAACACAACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATCCCAACCGATGAATGA | 1029 | 0.447 | MMSASARNRSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTSTATNTSQTIPSYTRNLSLTNNPNNITSPSSFPFSPLPSSMPCESQPFSQSYQNSSLNPFFYSQSISSRPPDSDFPPQDATTHQLFMDSGSYSHDQKDYRHVHGIREDVDERAFFPEASGSARSYTDSYQQLSMSSYKSYSNSNFQNINDSTNPRQQEQQQHCFVLGTDFKSTRPNKEKEAETTSQRPLHRFFGEWPPKNTTDSWLDLASNSRIPTDE | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo7g00452 | 342 | SMART | QLQ_2 | 10 | 46 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pumo7g00452 | 342 | PANTHER | GROWTH-REGULATING FACTOR 5 | 10 | 213 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Pumo7g00452 | 342 | MobiDBLite | consensus disorder prediction | 107 | 175 | - | - | |
Pumo7g00452 | 342 | MobiDBLite | consensus disorder prediction | 327 | 342 | - | - | |
Pumo7g00452 | 342 | MobiDBLite | consensus disorder prediction | 296 | 310 | - | - | |
Pumo7g00452 | 342 | Pfam | QLQ | 11 | 44 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pumo7g00452 | 342 | ProSiteProfiles | QLQ domain profile. | 11 | 46 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pumo7g00452 | 342 | ProSiteProfiles | WRC domain profile. | 76 | 120 | IPR014977 | - | |
Pumo7g00452 | 342 | Pfam | WRC | 77 | 119 | IPR014977 | - | |
Pumo7g00452 | 342 | MobiDBLite | consensus disorder prediction | 117 | 175 | - | - | |
Pumo7g00452 | 342 | MobiDBLite | consensus disorder prediction | 291 | 342 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo7g00452 | Pumo-Chr7 | 7202588 | 7204360 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo7g00452 | 1 | 340 | GRF Transcription Factor Family | AT3G13960 | 41.604 | 8.76e-71 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRF | Pumo7g00452 | WRC | 1.8e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo7g00452 | - | - | gmx:100806024 | 608.601 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo7g00452 | 7 | 7202588 | 7204360 | Pumo7g00452 | 7 | 7202588 | 7204360 | ECH |