Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00439 ATGCCATACAATTATTGTTTCCACGTTTCTCATAAAATCAAATATGTTGTATTTGTTTGTCTCTTGCTGGCAAAGGCAACGATTGAAGATAATTCTTCGTATCTAGTGACATCTTCTACTTGTCCCTGTAACACCCCTCAACCAAAGTACGATGTCTTTGTTAGCTTTAGAGGTGCAGATGTCCGCAAAGGTTTCCTTAGCCATTTGCTTGAGGCATTTTCTCTCAACCACATTGCTGCCTTTGTGGATTATAAAATTTCCAAAGGAGATGAAATATCTGATGCACTTCTTGGAGCAATTGAACGATCATCAGTTTCTTTGATTATATTTTCAGAAAACTACGCTTCTTCACATGCCTTTGCTGGACATGAAACAAAATATAGTTTGACCACTGTGCAAACCTGGAGATCTGCTTTGAATGAATCTGCTAATCTATCAGGATTTCATTCATCAACTTTTCGTGAATCCAATATGCCTTTCCGAGTTTCTCATAAAATCAAATACTATGTTGGATTTGTTTGTCTCTTGCTTGCAATGGCAACGATAGACAATAATTCTTCGCATCTAGTGACATCTTCTGCTTTTCCCAACGACACTCCTAAAATAAAGTACAATGTCTTTGTTAGCTTTAGAGGTGCAGACATTCGCCAAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCGGAACCACATTGCCGCCTTTGTAGATCATAACATTCTCAAAGGAGATGAACTATCTGAAGCACTTGTTGGAGCAATTGAAGGATCATTGATTTCGTTGATTGTATTTTCACAAAACTATGCTTCTTCACGTTGGTGTTTGTTAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAAGGATGGACAAATTGTAGTGCCTATTTTCTACAAAGTTGATCCTTCGGATGTACGACATCAAAAGGGGACTTATGGAGATGCCTTTGCTAAACATGAAACAAAATATACTGAGCTTGTCAAAGAGATAGTTAAATGTGTGTGGATGAGGTTGAATCATGTGCACCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGCACATGTTGAATCGTTGCTGCAATTAGAAGCCGCAGATGTTCGTATTATTGGAATTTGGGGTATGAGTGGCATTGGTAAGACAACTATTGCACAAGAAGTATATAATAAACACTATTTTGAATACGAAGGTTGTTGTTTTTTGGCTAACATAAGGGAAGAGTCACGAAGACATGGAATAATCTCATTAAAGAAAAAGCTTTTTTCAACACTATTAGGAGAAGAATATTTGAAAATTGACACACCTAATGGATTGCCTCAATACGTTGAGAGAAGGCTTCGTCGTACAAAAGTTCTTATTATTCTTGATGATATCGATGACTCAGACCAACTAGAAACTTTAGCTAGAACAGATTGGTTTGGATCGGGTAGTAGAATCATTGTGACAACTAAAGATAAACAGGTGCTTGCTAATGAGTTTGCTAATATATACGAGGTTGAGCCATCAAACTTTGATGAATCTTTACGGCTTTTCAATTTGAACGCCTTCAAGCAAAATCATCCTGAAATAGAGTACAATGAGCTATCAAAGAAAGTTGTTGATTATGCCAAAGGCATTCCATTTGTTCTTAAATTTTTGGGTCACCGTCTTCATGGAAAAGATAAAGAGATATGGGAAAGCCAATTAGAAAGACAAAACGTGCAAACCAAAAAGGTTCATGAAATTATTAAATTGAGTTACAATGATCTTGATCAGGATGAAAAGAAGATATTTATGGATATTGCATGTTTTTTCTTCAGGCTACGTCTAGAAGTAAAGCGCATAAATGTTTTATTGAAAGATCATGATTATTTAGTGGCTTCGGGATTAGAAAGGTTGAAGGATAAAGCTCTTGTAAGTATTTCTCAAGGAAATATTGTATCAATGCATGACATTATAAAAGAAACTACTTGGCATATTGCTCCCCAAGAATCTATTGAAGATCCTAGAAGCCAAATTCGACTATTTGATCTTGATGACGTCTATCAAGTACTAAAATACAACAAGGGTAACAAGGCTATCAAAAGCATAGTCATCAACTTGTTGAGAATCAAGCAATTGCAATTAAGCCCTCAAGTATTTACTGAGATGAGCAACCTCCATTTTCTAAATTTTCATAGCGTATGGTCCAGCAGTACTTTCCCCCAAGATCAATGGGGCTTATATCTTCCTCAAGGGCTTGAATCTTTGCCGAATGAACTAAGATATCTTAGATGGACGCATTACCCATTGGAATCTTTGCCTTCAAAGTTTTCTGCGGAAAATCTTGTTGAGTTGCACTTGCCATATAGCCGAGTGAAAAAACTTTGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTAAACTGTATTCATCTACAAATTTAAAGGAGCTACCAGACTTTTCAGTGGCCACAAATATTGAAATAATAGATCTTCGATTCTGTGTAGGGTTGACTAGAGTGCATCCATCAGTTTTCTCTCTCAAAAAGCTTGAGAAATTGGAATTAGGTGGATGCACTTCCCTCACAAGCCTTCGAAGCAATATCCATATGCAATCCCTTCGTTATCTCTCCCTCCATGGCTGCTTGGAGCTAAAGGATTTCTCAGTGACCTCAGAGAATCTGGTAAAGTTGAATTTAGAACTCACTAGTATCAAACAACTGCCTTCATCTATTGGATTTCAAAGCAACCTTAAAATGCTACGTCTAACATACACTTACATTGAGAGCTTGCCTGCAAGCATCAAGCATCTTACAAAGCTGCGACATCTAGATTTAAGGTATTGCATGGAGCTTCGGACACTACCAGAGCTTCCCCCGTCACTTGAAACACTAGATGTTCGCGAATGCGTATCATTGGAGACTGTAATGTTCCCTTCCATTGCTCAACAATGGAAGGAAAACAAGAAAAAAGGTACCTATGTGTATCCGGGGAGTGATGTTCCGGAATGGTTGGTGCATAAGACAACACATGGTTATGATTACGTAACTATTGCTCCACACTCATCTAACTCGGGCTTCATTTTTGGCTTTATTGTTTCGGATGTCTCGTATGGGGGTTCCACTTTGAAACTCAACATCACTGCTGGGGCTGAAGGTGAAGAAGTTAAGAGGGTTTGGGGTCAGCACAATCAACTTCAAATAGAAGAATTGGTTTATAGTAGTATTCCAAAGGAAAATTCTAAAGTCTACCCCGTTTCCTTGTGGAATGGCTGA 3246 0.3792 MPYNYCFHVSHKIKYVVFVCLLLAKATIEDNSSYLVTSSTCPCNTPQPKYDVFVSFRGADVRKGFLSHLLEAFSLNHIAAFVDYKISKGDEISDALLGAIERSSVSLIIFSENYASSHAFAGHETKYSLTTVQTWRSALNESANLSGFHSSTFRESNMPFRVSHKIKYYVGFVCLLLAMATIDNNSSHLVTSSAFPNDTPKIKYNVFVSFRGADIRQGFLSHLIEAFSRNHIAAFVDHNILKGDELSEALVGAIEGSLISLIVFSQNYASSRWCLLELVKIVECRKKDGQIVVPIFYKVDPSDVRHQKGTYGDAFAKHETKYTELVKEIVKCVWMRLNHVHQVNSKGLVGVGKRIAHVESLLQLEAADVRIIGIWGMSGIGKTTIAQEVYNKHYFEYEGCCFLANIREESRRHGIISLKKKLFSTLLGEEYLKIDTPNGLPQYVERRLRRTKVLIILDDIDDSDQLETLARTDWFGSGSRIIVTTKDKQVLANEFANIYEVEPSNFDESLRLFNLNAFKQNHPEIEYNELSKKVVDYAKGIPFVLKFLGHRLHGKDKEIWESQLERQNVQTKKVHEIIKLSYNDLDQDEKKIFMDIACFFFRLRLEVKRINVLLKDHDYLVASGLERLKDKALVSISQGNIVSMHDIIKETTWHIAPQESIEDPRSQIRLFDLDDVYQVLKYNKGNKAIKSIVINLLRIKQLQLSPQVFTEMSNLHFLNFHSVWSSSTFPQDQWGLYLPQGLESLPNELRYLRWTHYPLESLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNLKVLKLYSSTNLKELPDFSVATNIEIIDLRFCVGLTRVHPSVFSLKKLEKLELGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVTSENLVKLNLELTSIKQLPSSIGFQSNLKMLRLTYTYIESLPASIKHLTKLRHLDLRYCMELRTLPELPPSLETLDVRECVSLETVMFPSIAQQWKENKKKGTYVYPGSDVPEWLVHKTTHGYDYVTIAPHSSNSGFIFGFIVSDVSYGGSTLKLNITAGAEGEEVKRVWGQHNQLQIEELVYSSIPKENSKVYPVSLWNG 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00439 1081 Gene3D - 505 586 IPR042197 -
Pumo7g00439 1081 Gene3D Ribonuclease Inhibitor 877 967 IPR032675 -
Pumo7g00439 1081 FunFam Disease resistance protein (TIR-NBS-LRR class) 200 345 - -
Pumo7g00439 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 596 IPR027417 -
Pumo7g00439 1081 Gene3D Ribonuclease Inhibitor 679 876 IPR032675 -
Pumo7g00439 1081 Gene3D - 178 331 IPR035897 -
Pumo7g00439 1081 Pfam Leucine rich repeat 884 939 IPR001611 GO:0005515
Pumo7g00439 1081 SUPERFAMILY L domain-like 693 967 - -
Pumo7g00439 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 199 331 IPR035897 -
Pumo7g00439 1081 ProSiteProfiles TIR domain profile. 48 170 IPR000157 GO:0007165
Pumo7g00439 1081 Gene3D - 47 121 IPR035897 -
Pumo7g00439 1081 Pfam NB-ARC domain 361 583 IPR002182 GO:0043531
Pumo7g00439 1081 Pfam Leucine Rich Repeat 770 788 IPR011713 -
Pumo7g00439 1081 Gene3D - 332 498 IPR027417 -
Pumo7g00439 1081 ProSiteProfiles TIR domain profile. 202 337 IPR000157 GO:0007165
Pumo7g00439 1081 SMART till_3 203 346 IPR000157 GO:0007165
Pumo7g00439 1081 SMART till_3 49 182 IPR000157 GO:0007165
Pumo7g00439 1081 SUPERFAMILY "Winged helix" DNA-binding domain 572 681 IPR036390 -
Pumo7g00439 1081 Pfam TIR domain 203 324 IPR000157 GO:0007165
Pumo7g00439 1081 Pfam TIR domain 49 118 IPR000157 GO:0007165
Pumo7g00439 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 44 147 IPR035897 -
Pumo7g00439 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 164 IPR044974 GO:0006952
Pumo7g00439 1081 PRINTS Disease resistance protein signature 836 852 - -
Pumo7g00439 1081 PRINTS Disease resistance protein signature 447 461 - -
Pumo7g00439 1081 PRINTS Disease resistance protein signature 538 552 - -
Pumo7g00439 1081 PRINTS Disease resistance protein signature 371 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00439 Pumo-Chr7 6944953 6979382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00439 189 947 WRKY Transcription Factor Family AT4G12020 32.787 3.69e-104 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00439 - - gmx:100778934 1482.23