Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00435 ATGCCTTTTCAAGTTTTTCATAAAATCAAATATGTTGTATTTGTTTGTCTCATGCTGGCAACGACAACAGTAGACGATAACAATTCTTCGTATCCAGTGACATCTTTTACTTGTCCCAGTGACACTCCTCAAATAAAGTACGATGTCTTTGTTAGCTTTAGAGGTGCAGACATCCGCAAAGGTTTCCTCAGCCATTTGATTGAGGCATTTTCTCGAAAGAAAATTACTGCCTTTGTAGATTCTGAGATTCGCAAAGGAGATGAACTATCTGAAGCACTTGTTGGAGCAATTGAAGGATCATTAATATCGTTGATTATATTTTCAGAAACCTATGCTTCTTCACGTTGGTGTTTGTTAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAAAAATGGACAAATTGTACTGCCTATCTTCTACAAAGTAGATCCTTCATATGTTCGGCATCAAAAGGGGACTTATGAAGATGCCTTTGCTAAACATGAAAGAAAATATAGTTTGATCACTATGCAAATCTGGAGATCTGCTTTGAATGAATCTGCTAATCTATCAGGATTTCATTCATCAACTTTTGGGGATGAAGCTGAGCTTGTTAAAGAGATAGTTAAATCTATGTCCATGAGGTTGCATCATGTGCACCAAGTTAACTTGAAAAGGCTTGTTGGAATTGATGAACGAGTTGCACATGTAGAATCCATGCTACAATTAGAAGTAGCAGATGTTCGTATTATTGGAATATGGGGAATGGGTGGTATTGGTAAGGCAACCATTGCACAAGAAGTTTATAATAAACTACGTTTTGAATATGAAGGTGGTTGTTTTTTGGCTAACATAAGAGAAGAGTCAGGAAGGCATGGAATGGTCTCTTTAAAGAATCATCTTTTTTCAACATTATTAGGAGAAGATTTGAAAATTGACACACCTAATGGATTGCCTCAATATGTTGAGAGAAGGCTTCATCGTATGAAGGTTCTTATCATTCTTGATGATGTCAATGATTCAGAACAACTGGAAATTTTAGCAGGAACACGTGATTGGTTTGGATCAGGTAGCAGAATCATCATAACAACCAGAGATAAGCAGGTACTTGCTAAAGAGTTTGCTAATATATATGAGGTTGAGGCATTAAACTTTGATGAATCCTTACGGCTTTTCAATTTGAATGCCTTTAAACAAAATCATCTTGAAAGAGAGTACTATGAGCTATCAACGAAAGTGGTCGATTATACCAAAGGCATTCCATTAGTACTTAAAGTTTGGGGTCACCTTCTTCATGGAAAAGATAAAGAAATTTGGGAAAGCCAATTAGAAAGACTTAAAAAAGTGCAAAGCAAAAAGGTTCATGATATTATTAAATTGAGCTACAATGATCTTGATCAGGATGAAAAGAAGATATTTTTGGATATTGCATGTTTTTTCAATGGACTGAATCTGAAAGTAAAGAACATAAATTTTCTATTGAAAGATCATGATTATTCAGTGACTGCAGAATTAGAAAGATTGAAGGATAAAGCTCTTATCAGTATTTCTCAAGAGAATATTGTATCAATGCATGACATTATACAAGAAACAGCTCGGCAGATTGCTCGCCAATAA 1596 0.3509 MPFQVFHKIKYVVFVCLMLATTTVDDNNSSYPVTSFTCPSDTPQIKYDVFVSFRGADIRKGFLSHLIEAFSRKKITAFVDSEIRKGDELSEALVGAIEGSLISLIIFSETYASSRWCLLELVKIVECRKKNGQIVLPIFYKVDPSYVRHQKGTYEDAFAKHERKYSLITMQIWRSALNESANLSGFHSSTFGDEAELVKEIVKSMSMRLHHVHQVNLKRLVGIDERVAHVESMLQLEVADVRIIGIWGMGGIGKATIAQEVYNKLRFEYEGGCFLANIREESGRHGMVSLKNHLFSTLLGEDLKIDTPNGLPQYVERRLHRMKVLIILDDVNDSEQLEILAGTRDWFGSGSRIIITTRDKQVLAKEFANIYEVEALNFDESLRLFNLNAFKQNHLEREYYELSTKVVDYTKGIPLVLKVWGHLLHGKDKEIWESQLERLKKVQSKKVHDIIKLSYNDLDQDEKKIFLDIACFFNGLNLKVKNINFLLKDHDYSVTAELERLKDKALISISQENIVSMHDIIQETARQIARQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00435 531 ProSiteProfiles TIR domain profile. 45 209 IPR000157 GO:0007165
Pumo7g00435 531 Pfam TIR domain 46 214 IPR000157 GO:0007165
Pumo7g00435 531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 530 IPR044974 GO:0006952
Pumo7g00435 531 SUPERFAMILY Toll/Interleukin receptor TIR domain 40 186 IPR035897 -
Pumo7g00435 531 Gene3D - 44 210 IPR035897 -
Pumo7g00435 531 SUPERFAMILY "Winged helix" DNA-binding domain 445 531 IPR036390 -
Pumo7g00435 531 FunFam Disease resistance protein (TIR-NBS-LRR class) 43 211 - -
Pumo7g00435 531 Gene3D - 375 459 IPR042197 -
Pumo7g00435 531 PRINTS Disease resistance protein signature 243 258 - -
Pumo7g00435 531 PRINTS Disease resistance protein signature 318 332 - -
Pumo7g00435 531 PRINTS Disease resistance protein signature 410 424 - -
Pumo7g00435 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 469 IPR027417 -
Pumo7g00435 531 SMART till_3 46 183 IPR000157 GO:0007165
Pumo7g00435 531 Pfam NB-ARC domain 238 457 IPR002182 GO:0043531
Pumo7g00435 531 Gene3D - 211 371 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00435 Pumo-Chr7 6914192 6925033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00435 47 531 WRKY Transcription Factor Family AT4G12020 32.377 1.51e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00435 - - gmx:100802823 846.654