Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00434 ATGCCTTTCCGAGTTTCTCATAAAATCAAATACTATGTTGGATTTGTTTGTCTCTTGCTTGCAACGGCAACGATAGACAATAATTCTTCGCATCTAGTGACATCTTCTGCTTTTCCCAATGACACTCCTAAAATAAAGTACGATGTCTTTGTTAGCTTTAGAGGTGCAGACATTCGCCAAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCGGAACCACATTGCCGCCTTTGTAGATCATAACATTCTCAAAGGAGATGAACTGTCTGAAGCACTTGTTGGAGCAATTGAAGGATCATTGATTTCGTTGATTGTGTTTTCACGAAACTATGCTTCTTCACGTTGGTGTTTGTTAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAGAGATGGACAAATTGTAGTGCCTATTTTCTACAAAGTAGATCCTTCGGATGTCCGACATCAAAAGGGGACTTATGAAGATGCCTTTGCTAAACATGAAAGAAAATATAGTTTGACGACTATGCAAACCTGGAGATCTGCTTTGAATGAATCTGCTAATCTATCAGGATTCCATTCATCAACTTTTCGGGATGAAGCTGAACTTGTCAAAGAGATAGTTAAATGTGTGTGGATGAGGTTGAATCATGTGCACCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGCACATATAGAATCATTGTTGCAATTAGAAGTCGTAGATGTTCGTATTGTTGGAATCTGGGGCATGAGTGGCATTGGTAAGACAACTATTGCACAAGAAGTATATAATAAACATTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGGGAAGAGTCACGAAGACATGGAATAATCTCGTTAAAGAAAAAGCTTCTTTCAACACTATTAGGAGAAGAATATTTGAAAATTGACACACCTAATGGATTGCCTCAATACGTTGAGAGAAGGCTTCGTCGTACGAAGGTTCTTATTATTCTTGATGATATCGATGACTCAGACCAACTAGAAACTTTAGCTAGAACAGATTGGTTTGGATCCGGTAGTAGAATCATTGTTACAACTAAAGATAAACAGGTGCTTGCTAATGAGTTTGCTAATATATATGAGGTTGAGCCATTAAACTTTGATGAATCTTTACGGCTTTTCAATTTGAACGCCTTCAAACAAAATCATTCTGAAATAGAGTACAATGAGCTATCAAAGAAAGTTGTTGATTATGCCAAAGGCATTCCATTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGAAAAGATAAAGAGATATGGGAGAGCCAATTAGAAAGACAAAACGTGCAAACCAAAGAGATTCATGATATTATTAAATTGAGTTACAATGATCTTGATCAGGATGAAAAGAAGATATTTATGGATATTGCAAGTTTTTTCTTCGGGCTGCGTCTAGAAGTAAAGCGCATAAATGTTTTATTGAAAGATCATGATTATTCAGTGGCTTCTGGATTAGAAAGGTTGAAGGATAAAGCTCTTGTAAGTATTTCTCAAGGAAATATTGTATCAATGCATGACATTATAAAAGAAACTGCTTGGAAGATTGCTCCCCAAGAATCCATTGAAGATCCTAGAAGCCAAATTCGACTATTTGATCCTGATGACGTCTATCAAGTACTAAAATACAACAAGTGTAACAAGGCTATCAGAAGCATAGTCGTCAACTTGTTGAGAATCAAGCAATTGCAATTAAGCCCTCAAGTATTTACTAAGATGAGCAACCTCCATTTTCTAAATTTTCATAGCGTATGGTCTAGCAGTACTTTCCCCCAAGATCAATGGGGCTTGTATCTTCCTCAAGGGCTTGAATCTTTGCCGAATGAACTAAGATATCTTAGATGGACGCATTACCCCTTGGAATCTTTGCCTTCAAAGTTTTCTGCGGAAAATCTTGTTGAGTTGCACTTGCCATATAGTCATGTGAAAAAACTTTGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTAAACTGTATTCATCTACAAATGTAAAGGAGCTGCCAGACTTTTCAATGGCCACAAATCTTGAAATAATAGATCTTCGATTCTGTGTAGGGTTGACTATAGTGCATCCATCAGTTTTCTCTCTCAATAAGCTTGAGAAATTGGAATTAGGTGGATGCACTTCCCTCACAAGCCTTCGAAGCAATATCCATATGCAATCCCTTCGTTATCTCTCCCTCCATGGTTGCTTGGAGCTAAAGGATTTCTCAGTGACCTCAAAGAATCTGGTAAAGTTGAATTTAGAACTCACTAGTATCAAACAACTGCCTTCATCTATTGGATGGCAAAGCAACCTTAAAATGCTACGTCTAGCATACACTTACATTGAGAGCTTGCCTGCAAGCATCAAGCATCTTACAAAGCTGCGACATCTAGATTTAAGATATTGCATGGAGCTTCGGACTCTACCAGAGCTTCCCCCGTCACTTGAAACACTAGATGTTCGTGAATGCGTATCATTGGAGACTGTAATGTTCCCTTCTATTGCTCAACAATGGAAGGAAAACAAGAAAAAGGTTGGCTTCTGGAACTGCTTACAATTGGATGAATACTCTCTCATGGCTATTGAGATGAATGCACAAATTAACATGGTGAAATTTGCACACCAACATTTATCTACATTTGGTGATCAAGCTCAAGGTACCTATGTGTATCCGGGAAGCGATGTTCCGGAATGGTTGGTGCATAAGACAACACATGGTTATGATTACGTAACTGTTGCTCCACACTCCTCTCACTCGGGCTTCATCTTTGGCTTCATTGTTTCGGAAGTCCCGTATGGGGGTTCCACTTTGAAACTCAACATTACTGCTGGGGCTGAAGGTGAAGAAGTTAACAGTATAAATGTGTACTTGGGAAGACCACATCATGGTAGTAAATCAGATCATGTGTATCTCATGTACGACCAAGCATGTTCTCACTTTCTAAATAGACGTGCCAAACATCATCCAATGTTGAAAATTAAGGTTACAGCTGCATCGCAAACGCTCACGTCACAGTATGTACCGTTGCAGTTAAGAGGGTTTGGGGTCAGCACAATCAACAATTTTCTTCGAATAGAAGAATTGGTTTATAGTAGTGTTTCAAAGGAAAATTCTAAAGTCTACCCTGTTTCCTTGTGGAATGGCTGA 3174 0.3844 MPFRVSHKIKYYVGFVCLLLATATIDNNSSHLVTSSAFPNDTPKIKYDVFVSFRGADIRQGFLSHLIEAFSRNHIAAFVDHNILKGDELSEALVGAIEGSLISLIVFSRNYASSRWCLLELVKIVECRKRDGQIVVPIFYKVDPSDVRHQKGTYEDAFAKHERKYSLTTMQTWRSALNESANLSGFHSSTFRDEAELVKEIVKCVWMRLNHVHQVNSKGLVGVGKRIAHIESLLQLEVVDVRIVGIWGMSGIGKTTIAQEVYNKHCFEYEGCCFLANIREESRRHGIISLKKKLLSTLLGEEYLKIDTPNGLPQYVERRLRRTKVLIILDDIDDSDQLETLARTDWFGSGSRIIVTTKDKQVLANEFANIYEVEPLNFDESLRLFNLNAFKQNHSEIEYNELSKKVVDYAKGIPFVLKLLGHRLHGKDKEIWESQLERQNVQTKEIHDIIKLSYNDLDQDEKKIFMDIASFFFGLRLEVKRINVLLKDHDYSVASGLERLKDKALVSISQGNIVSMHDIIKETAWKIAPQESIEDPRSQIRLFDPDDVYQVLKYNKCNKAIRSIVVNLLRIKQLQLSPQVFTKMSNLHFLNFHSVWSSSTFPQDQWGLYLPQGLESLPNELRYLRWTHYPLESLPSKFSAENLVELHLPYSHVKKLWQEVPDLVNLKVLKLYSSTNVKELPDFSMATNLEIIDLRFCVGLTIVHPSVFSLNKLEKLELGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVTSKNLVKLNLELTSIKQLPSSIGWQSNLKMLRLAYTYIESLPASIKHLTKLRHLDLRYCMELRTLPELPPSLETLDVRECVSLETVMFPSIAQQWKENKKKVGFWNCLQLDEYSLMAIEMNAQINMVKFAHQHLSTFGDQAQGTYVYPGSDVPEWLVHKTTHGYDYVTVAPHSSHSGFIFGFIVSEVPYGGSTLKLNITAGAEGEEVNSINVYLGRPHHGSKSDHVYLMYDQACSHFLNRRAKHHPMLKIKVTAASQTLTSQYVPLQLRGFGVSTINNFLRIEELVYSSVSKENSKVYPVSLWNG 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00434 1057 SUPERFAMILY "Winged helix" DNA-binding domain 444 553 IPR036390 -
Pumo7g00434 1057 SMART till_3 46 183 IPR000157 GO:0007165
Pumo7g00434 1057 PRINTS Disease resistance protein signature 410 424 - -
Pumo7g00434 1057 PRINTS Disease resistance protein signature 798 814 - -
Pumo7g00434 1057 PRINTS Disease resistance protein signature 319 333 - -
Pumo7g00434 1057 PRINTS Disease resistance protein signature 243 258 - -
Pumo7g00434 1057 Gene3D - 376 458 IPR042197 -
Pumo7g00434 1057 Gene3D - 44 211 IPR035897 -
Pumo7g00434 1057 FunFam Disease resistance protein (TIR-NBS-LRR class) 43 211 - -
Pumo7g00434 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 749 IPR044974 GO:0006952
Pumo7g00434 1057 Pfam NB-ARC domain 231 453 IPR002182 GO:0043531
Pumo7g00434 1057 Pfam Leucine Rich Repeat 642 660 IPR011713 -
Pumo7g00434 1057 Gene3D Ribonuclease Inhibitor 549 747 IPR032675 -
Pumo7g00434 1057 SUPERFAMILY L domain-like 565 836 - -
Pumo7g00434 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 468 IPR027417 -
Pumo7g00434 1057 Gene3D - 212 370 IPR027417 -
Pumo7g00434 1057 Pfam TIR domain 46 217 IPR000157 GO:0007165
Pumo7g00434 1057 Gene3D Ribonuclease Inhibitor 748 849 IPR032675 -
Pumo7g00434 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 42 186 IPR035897 -
Pumo7g00434 1057 ProSiteProfiles TIR domain profile. 45 209 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00434 Pumo-Chr7 6880400 6886728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00434 32 819 WRKY Transcription Factor Family AT4G12020 33.375 8.11e-111 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00434 - - gmx:100778934 1819.28