Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00425 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAGGCAGTTCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGTATATAAGAGCTGCAGGCCATGTTCAGGATCTTCCAATGGTAACAGGAATAAGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGCAGAACCGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAATGGAAGGTGGTAGGGTGAAAGGGCTTTCAAGTGGAGAAGGAACACCAGCATCAGTGAGTGGACGCACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAATGGATTGCACAAGTGGAGCCTGGTGTGCTCATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAGCGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAGCAAGCAGTTCCACTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGCGCACCCCGTCATTTTCACCACCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCGCCACCAAATGCAACCTCACCCTTGCTACGAAACAAGCGGTCTGGCATCAACACCTAACCTTTCCAACATTAGTGCACCAAAGACTGAAAGATCATCCCTTGATGGTTCTGTAAGGACCAGTTCATCTGGAGAAGATCACTCGGGTGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGGGTCTACAGTCACTATCAGATCACTGCCAGGTGGAACCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCAAGATTGTGGTGGGAAGAGAACCGTGCTAG 1086 0.4899 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGVYKSCRPCSGSSNGNRNKKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKEMEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGMGYSSSDSLDRHQMQPHPCYETSGLASTPNLSNISAPKTERSSLDGSVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYSHYQITARWNQRTQACPVQPRKVWRNACKIVVGREPC 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00425 361 MobiDBLite consensus disorder prediction 91 123 - -
Pumo7g00425 361 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Pumo7g00425 361 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 324 IPR044532 -
Pumo7g00425 361 MobiDBLite consensus disorder prediction 262 310 - -
Pumo7g00425 361 MobiDBLite consensus disorder prediction 200 310 - -
Pumo7g00425 361 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Pumo7g00425 361 MobiDBLite consensus disorder prediction 57 76 - -
Pumo7g00425 361 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00425 Pumo-Chr7 6629587 6634404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00425 1 324 Major Intrinsic Protein MIP AT1G31880 45.133 7.30e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00425 - - gmx:100805480 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00425 7 6629587 6634404 Pumo7g00425 7 6629587 6634404 ECH