Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00419 ATGAGCATGACTGTGGCAGAGGATGAATCTAGTGAAGAGGTTCATGTTCCGGGTGAGATTGATTGGCAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTACAGCCCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCTCAGTCCCAAGTTTCTTGCATCAACACTGCATTTTCATTGATTAGGGGTGAGGGTTTTAGAGCATTGTACCGTGGGTTTGGGACTTCTTTGATGGGCACAATCCCTGCTAGGGCTCTTTACATGGCTGCATTAGAGGTTACCAAGAGCAATGTGGGCACTGCCACTGTAAGGCTTGGTCTTGCTGAACCAACTGCTGCTGCAGTTGCCAATGCTGCTGCTGGCTTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCTATTGATGTTGTGAGCCAGAGGTTGATGATTCAAGGTGGTTGTGATTCCGGCAATCCTAAGGCTCCGGCTCTTCGGTACATCAACGGGATTGATGCCTTCAGGAAAATCTTGAGTAGTGATGGTCTTAGGGGCTTGTATAGGGGTTTTGGGATATCAATTTTGACCTATGCCCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGGGAAATGATAGTGCATTGAAGCCTGATACAAAGACTGTGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGACACCATCAAGACAAGACTGCAGGTCTTGGATGGCGACGAGAACGGCCGTCGTGGACCGACGGTTATGCAGACAGTGAGGAGTCTGGTTAGGGAAGGTGGTTGGATGGCTTGCTATAGAGGATTGGGACCTAGGTGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGTTCCTCAAACGGCTCTCTGCGAAGAATCAAGAGGTTTTGACATGA 1020 0.4873 MSMTVAEDESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSTALYPVVVLKTRQQVAQSQVSCINTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRLGLAEPTAAAVANAAAGLSAAMAAQLVWTPIDVVSQRLMIQGGCDSGNPKAPALRYINGIDAFRKILSSDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKGNDSALKPDTKTVMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00419 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Pumo7g00419 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 330 IPR018108 -
Pumo7g00419 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
Pumo7g00419 339 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Pumo7g00419 339 Pfam Mitochondrial carrier protein 245 334 IPR018108 -
Pumo7g00419 339 Pfam Mitochondrial carrier protein 125 219 IPR018108 -
Pumo7g00419 339 Gene3D Mitochondrial carrier domain 30 337 IPR023395 -
Pumo7g00419 339 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 336 - -
Pumo7g00419 339 SUPERFAMILY Mitochondrial carrier 23 327 IPR023395 -
Pumo7g00419 339 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Pumo7g00419 339 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Pumo7g00419 339 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Pumo7g00419 339 PRINTS Mitochondrial carrier protein signature 250 272 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00419 Pumo-Chr7 6531275 6532824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00419 1 336 Chloroplast and Mitochondria Gene Families AT1G72820 74.203 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00419 K15121 - gmx:100789089 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00419 7 6531275 6532824 Pumo7g00419 7 6531275 6532824 ECH