Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00374 ATGTTTAGCATGTTATCAAACCATATCATCTCTGTTGAAAGAATAAAGCAATTCATTCACATACCAGCAGAGCCTCCTGCCATTGTGGAGGAAAACAGACCTCCATCTTCATGGCCTTCCAAGGGTAGGATTGATCTTGGAGCCCTAGAGATTAGATATCATCCCAATGCCCCGTTAGTCCTTAAGGGTATACATTGTACGTTTAAAAAAGGGAATAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAACCTTCAACTGGTGTTATTCTCATAGATGGGATTAACATATGCTCAATGGGGTTAAAGGATTTGAGAATGAAACTCAGCATCATCCCTCAAGAACCAACCCTTTTCAAGGGAAGCATTAGGACCAACTTGGATCCTCTAGGCTTCTATGAAGATGATGAAATATTGAAGGCTTTAGAGAAATGTCAGCTAAAGGAAACAATCAGCAAGCTACCAGGTCTCTTGGACTCTTCTGGGAAACTAGTGGAATATGATGAGCCTTCAAAACTTATGGGGACCAACTCTTGGTTCTCTAAGTTGGTCGCTGAATATTGGTCGAGCTGCAGGAAGAACTCCTGCCCAAATATTAGCAGGCAGCAACATTGA 651 0.4178 MFSMLSNHIISVERIKQFIHIPAEPPAIVEENRPPSSWPSKGRIDLGALEIRYHPNAPLVLKGIHCTFKKGNRVGVVGRTGSGKTTLISALFRLVEPSTGVILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGFYEDDEILKALEKCQLKETISKLPGLLDSSGKLVEYDEPSKLMGTNSWFSKLVAEYWSSCRKNSCPNISRQQH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00374 216 FunFam ATP-dependent bile acid permease, putative 29 176 - -
Pumo7g00374 216 SMART AAA_5 70 212 IPR003593 GO:0016887
Pumo7g00374 216 Pfam ABC transporter 61 163 IPR003439 GO:0005524
Pumo7g00374 216 Gene3D - 27 189 IPR027417 -
Pumo7g00374 216 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 161 - -
Pumo7g00374 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 171 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00374 Pumo-Chr7 4918927 4920380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00374 42 172 Calmodulin-binding Proteins AT2G36910 32.593 1.86e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00374 - - gmx:100804798 313.538