Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00373 ATGGATATTAATGATTTTAGCCATGGTGATCTTACTGAAATAGGCCAGCAAGGGATTAACATGAGTGGAGGACAGAGGCAAAGGATTCAACTAGCTCAAGCAGTTTACAATGATGCTGACATCTATCTCCTTGATGACCCATTCAGTGCAGTTGACGCACACACTGCTGCTATTCTGTTCAATGACTGTGTCATGACTGCTCTAAGAGAGAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCACAGAAGTTGATACGATCCTGGTAATGGAGGGTGGAAAAGCTATTCAATCAGGTAGTTATGAAGATCTCCTGACAGCCGGAACTGCCTTTGAACAACTTGTGAGTGCCCATAAAGCTACATTAACAGGAGTGGATCAAAAAAATGAAAATGATAGAGATTTTGATATTGAGGTTATGGTACATCCAGAAGAGTCTCAAAGTTTTAATCTCACTAAAAATCAAAGTGAGGGGGTGATTTCTACCAAAGGTCAACTTGGGGCACAACTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGGTGGAAGGCATTCTGGGATTATATTTCATTTTCCAGGGGGTCATTCTTGCTGTGTTTAATCATGTTAGCACAATTTGCTTTTCTTGCTTTGCAGACTGCATCAACCTATTGGCTTGCTCTAGCCATTGAAATTCCAAAAGTAACTAGTGGCATTTTGATTGGAGTTTTCTCATTATTTTCATTACTTAGTGCTGTATTTATATATATAAGGTCTCTCTTGGCTGCTAATCTTGGATTAAAAGCTTCTAAAGCCTTCTTCTCAAGTTTCACTTCAGCTATCTTCGATGCTCCTATGTTGTTCTTTGACTCAACCCCTGTAGGAAGGATTTTAACCCTAGCTTCGTCAGATTTGAGTATTTTGGACCTTGATATTCCTTATACTCTCCCTTTAGTAGCATTTGTAGCAGCTGAAATTCTGGTTACAATATGTGCAATGGTTTCTGTCACATGGCAAGTTCTCATTGTTGCTATTCCTGCTACCGTGGCATCAGTATATATTCAGTCAGTTTTAAGGATTGAAGTACTTCAAAATTTGACAGTCTTCACTGCAGCTTTATTACTTATTCTACTTCCCAAGGGATATGTACCTTCAGGCCTTGTGGGATTGTCTCTTTCTTACGCGTTCACATTGTTCACATTGAAAGAATCCCAAGTATTTTGGTGTTGA 1218 0.3908 MDINDFSHGDLTEIGQQGINMSGGQRQRIQLAQAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLTEVDTILVMEGGKAIQSGSYEDLLTAGTAFEQLVSAHKATLTGVDQKNENDRDFDIEVMVHPEESQSFNLTKNQSEGVISTKGQLGAQLTQEEEKEIGDVGWKAFWDYISFSRGSFLLCLIMLAQFAFLALQTASTYWLALAIEIPKVTSGILIGVFSLFSLLSAVFIYIRSLLAANLGLKASKAFFSSFTSAIFDAPMLFFDSTPVGRILTLASSDLSILDLDIPYTLPLVAFVAAEILVTICAMVSVTWQVLIVAIPATVASVYIQSVLRIEVLQNLTVFTAALLLILLPKGYVPSGLVGLSLSYAFTLFTLKESQVFWC 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00373 405 Gene3D ABC transporter type 1, transmembrane domain 141 366 IPR036640 GO:0005524|GO:0016020
Pumo7g00373 405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 203 355 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g00373 405 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 353 - -
Pumo7g00373 405 Pfam ABC transporter transmembrane region 201 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g00373 405 Gene3D - 1 140 IPR027417 -
Pumo7g00373 405 SUPERFAMILY ABC transporter transmembrane region 186 395 IPR036640 GO:0005524|GO:0016020
Pumo7g00373 405 Pfam ABC transporter 12 48 IPR003439 GO:0005524
Pumo7g00373 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 118 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00373 Pumo-Chr7 4916620 4918926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00373 12 110 Calmodulin-binding Proteins AT2G36910 28.283 5.83e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00373 - - gmx:100804798 619.002