Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00365 ATGGGTGGCTCAGGAAGATGGCTGAAGTCGCTCATCTCTCTCAGAAAGCCCTCCACAACTGATCAAGAGAAGGGTGGTGATAAGAGTAAGAGAAAGTGGAAGTTATGGAAGAGCACTTCAGAAGGGTTTGGGATTGGATCATCAATGCAGAAGGGGCAGGGTGGTGGTGGTGCTTCCTTTGTGGTGGATGATGGAGCATTTGCTGCTGCTTTGGCTGCTGTGGTAAGAACTCCACTCAAAGACTTTATGGTCATCAAGCAGGAATGGGCTGCCATTCGAATCCAGGCAGTGTTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCACGGAATGTGGGGAACTCTCAAGAAGGGAAATCTCAAGGGTGGTGTGACATTCCAGGAACTGCGGAAGAAGTTAAGGCAAAATTACAAATGAGGCAGGAAGGAGCAATTAAGAGGGATAGAACAAAGGCATACTCTCAGTCTAAGAAGAAATCAACAGTGAGTTCGAGTTCAAACTCAAGAGCTGCTAAGTCAGTGATTCCTCTCAAGAACCGCAACCTAGACAGCAAGAGCTCAGGATGGAGCATGTTAGATCGCTGGATGAGTGCAAAGCCATGGGAGAGCAGGTCTATGGTAGAGATGTATTTGGAATCACCTGACATGACCCCAGTGACCAGTAAAAGTGATCATATTGTTCTTCCCTTTAATTCAGATAAACAAAATGGCTCGGTCAAAGCAAGAAGGAATGGTGTGACAACCAGGATTTCAACTAAATCTCTCACAACTAGTCAATCAACTCCATCATCTTCAGCTATAAGCTCTGAATGCATGTATGATGATAGCCCTATGTCAACTTCATGCACATCAGAATCACCACCTCTACCATCTACCAACAATGTTATGGTGGAAGCAACAGAGGAAAGAAATGTTTGTAAACCAAGCTACATGAGTCTGACAGCATCAACCAAAGCTAAACTGAAACCCTATAGGTGTTTTTCTCAGAATTCAAAGAGAATCTTTATGGATGATTGTGTGTCACTATGTGGAGTTACTAGAAGCAGTTCTGGTTCCTATCCTTCTGCTAATACATGGAGGAATCCCTATGCAACACCTCTAAGGACAAGTTATCAAAAACGATATACATTGGAAGATAAGTAG 1260 0.4476 MGGSGRWLKSLISLRKPSTTDQEKGGDKSKRKWKLWKSTSEGFGIGSSMQKGQGGGGASFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGNSQEGKSQGWCDIPGTAEEVKAKLQMRQEGAIKRDRTKAYSQSKKKSTVSSSSNSRAAKSVIPLKNRNLDSKSSGWSMLDRWMSAKPWESRSMVEMYLESPDMTPVTSKSDHIVLPFNSDKQNGSVKARRNGVTTRISTKSLTTSQSTPSSSAISSECMYDDSPMSTSCTSESPPLPSTNNVMVEATEERNVCKPSYMSLTASTKAKLKPYRCFSQNSKRIFMDDCVSLCGVTRSSSGSYPSANTWRNPYATPLRTSYQKRYTLEDK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00365 419 Coils Coil 418 419 - -
Pumo7g00365 419 MobiDBLite consensus disorder prediction 178 214 - -
Pumo7g00365 419 Pfam IQ calmodulin-binding motif 89 108 IPR000048 GO:0005515
Pumo7g00365 419 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Pumo7g00365 419 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Pumo7g00365 419 Gene3D - 84 139 - -
Pumo7g00365 419 MobiDBLite consensus disorder prediction 288 308 - -
Pumo7g00365 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 129 IPR027417 -
Pumo7g00365 419 MobiDBLite consensus disorder prediction 178 194 - -
Pumo7g00365 419 ProSiteProfiles IQ motif profile. 87 115 IPR000048 GO:0005515
Pumo7g00365 419 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Pumo7g00365 419 MobiDBLite consensus disorder prediction 195 214 - -
Pumo7g00365 419 SMART iq_5 86 108 IPR000048 GO:0005515
Pumo7g00365 419 SMART iq_5 109 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00365 Pumo-Chr7 4802696 4805549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00365 1 402 IQD Protein Family AT1G72670 43.056 1.77e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00365 - - gmx:100784093 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04140 4 82029075 82031562 Pumo7g00365 7 4802696 4805549 PCT