Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00345 ATGGTTAAGGTGGACAGCAAGCTTAGGATTGTACAAGAACCAGCCACCAAGCTGCAACGTTCCGGTGACAGAAGCCATTTTAGCATTGCAATCCCACCATCAAAGTCATCTTCGGAAGGTCATTCAAGTATTGCACACCCACCTTCTGAGTCATCTTCTGGTGTACCTGCAAGTATTGCACTTTCACCTTCCAAGTCAATTCACAAAGCTCCTACAATTGTATGGACACATGGTTCTGAGGATTCTCCTATCTCACATCATAAGCATCACTATTCCAAAAGAAAGTCCCGCAATCCAACTCCAGCGGCAGCACCAACCTACCCAGTCCAGGCTCCTACATACACTCATCAAGGTCCTTCAGTCTTCAAATCACAACCTCCTTTCTCTTCACCAAATATTAAGGATAATCATGCCCCTGCACATGCACCAGCAATTCTGCCAGCTCACCTGGATGCACCCTCTTCTTCACCTAGAATTTCTCCTCTAGGTTCATCATTGAAGAAGAAAAAGACTCCACCACCAGCATATACATTGGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGTCAATGACTTGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAACTCCATATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTTCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTTTGCTGAACCATACCCAGGTTCGCATTGTGGGAGCTGATGCAGCTAATGAGCAACTGGAGAAAACCACTGTTCTCATAGACCTAGTACCCAAAGGAGTAAAATTTGATGATACCACCGCATTTTTAATATATAAGAAATTCTGGCACGGGGAGATTCTGATAGATACTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCGTCTCCACCTTCAACTCCCTCAGATGCTTCTGGTATAGATGATGGGCCAAATCCAGGACATGACAACAATGGAACGCTGATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAAAAAGAAGAGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTCATTGTATTCATTGGTCTTGCTTGGCTTTGTCTGCTGAAATGCCGCACCTATGTTCATGAACATGAACCAGTTCCAGATGGTTTTATTTCATCCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTGACTCATGGAATCAGGCTAGGTTCTGGATCACGGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTGGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGGATTGTTTACAGAGGTATTCTAAATGATGGGAGGGATGTAGCCGTGAAGATTCTCAAAAGAGATGATCAGCGAGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGCAATTGCATCGATGTGTGTGCAACCAGAAGTCTCTCAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTTGTATGCAGTGAGTTTGAGGAACCAGACTTTATAAGATCAAAGAGTTCTCGAGAGGGTCTTCTAACTGATGTGGAAGGAAAGTTTTCTGAAGCTTCAGGTGAAAGAGTGGAATTTTCAGACCATCAAAAAACTCTCTCTGGCTATCAATCTGGTGAAGAAAAGGTAGGATTATCAACATCAGAGTTGCTCAGTACTTCAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGTTCAGGGCCTCTAACTATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCTCCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCGTTAA 2049 0.428 MVKVDSKLRIVQEPATKLQRSGDRSHFSIAIPPSKSSSEGHSSIAHPPSESSSGVPASIALSPSKSIHKAPTIVWTHGSEDSPISHHKHHYSKRKSRNPTPAAAPTYPVQAPTYTHQGPSVFKSQPPFSSPNIKDNHAPAHAPAILPAHLDAPSSSPRISPLGSSLKKKKTPPPAYTLVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLHINIAIYKFFPLVSELAKEIAASVLLNHTQVRIVGADAANEQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWHGEILIDTSVFGAYEVLYVHYPGLPPSPPSTPSDASGIDDGPNPGHDNNGTLMKPLGVDVPKKKKEESNGRMIVIIVLSSVTAFIVFIGLAWLCLLKCRTYVHEHEPVPDGFISSSSKQSRAARSLTHGIRLGSGSRSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGIVYRGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEEPDFIRSKSSREGLLTDVEGKFSEASGERVEFSDHQKTLSGYQSGEEKVGLSTSELLSTSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSSSEHGFSTKLWPGSR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00345 682 MobiDBLite consensus disorder prediction 75 174 - -
Pumo7g00345 682 FunFam receptor-like serine/threonine-protein kinase ALE2 427 529 - -
Pumo7g00345 682 MobiDBLite consensus disorder prediction 661 676 - -
Pumo7g00345 682 MobiDBLite consensus disorder prediction 317 346 - -
Pumo7g00345 682 Pfam Protein kinase domain 456 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00345 682 SUPERFAMILY Protein kinase-like (PK-like) 438 566 IPR011009 -
Pumo7g00345 682 MobiDBLite consensus disorder prediction 1 63 - -
Pumo7g00345 682 MobiDBLite consensus disorder prediction 661 682 - -
Pumo7g00345 682 MobiDBLite consensus disorder prediction 110 132 - -
Pumo7g00345 682 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Pumo7g00345 682 Gene3D Phosphorylase Kinase; domain 1 427 529 - -
Pumo7g00345 682 PANTHER OS01G0750732 PROTEIN 540 584 - -
Pumo7g00345 682 ProSiteProfiles Protein kinase domain profile. 454 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00345 682 MobiDBLite consensus disorder prediction 30 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00345 Pumo-Chr7 4502864 4509034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00345 426 682 Receptor kinase-like Gene Family AT5G56890 36.727 6.57e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pumo7g00345 Pkinase 6.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00345 - - gmx:100814040 922.154