Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00339 ATGAAGACCAGTGACAGTGAGTATCTGGTGGAACATCAACATGGTGCTGGTTTTCATAATAAGATGGAAACAGTTACTGACTCCAAGAAGAGCAAGGGGCATGAGGGCCCAATTTGCCTCAAGGTTTTTCCATCTGGCCAAGCCTTGGGTGGCCATAAGAGATCTCACATGACTGGTGGGTCTGAGAGTAGAAGCTTTCAAACAGTTGTGCTTCAGGAACCAGTGGCAGAAATTAGGGACTTCCTTGATCTTAATCTTCCTACTGCTACTGAAGAAGAAAGAAATAGCCATGCTGACTCTAACAGACCCTGGTGA 315 0.4571 MKTSDSEYLVEHQHGAGFHNKMETVTDSKKSKGHEGPICLKVFPSGQALGGHKRSHMTGGSESRSFQTVVLQEPVAEIRDFLDLNLPTATEEERNSHADSNRPW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00339 104 Pfam C2H2-type zinc finger 37 57 - -
Pumo7g00339 104 MobiDBLite consensus disorder prediction 1 66 - -
Pumo7g00339 104 MobiDBLite consensus disorder prediction 1 36 - -
Pumo7g00339 104 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 12 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00339 Pumo-Chr7 4435982 4436296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00339 29 92 C2H2 Transcription Factor Family AT1G26610 60.000 2.17e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00339 - - gmx:102669916 186.037