LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo7g00334	ATGGACAATATTTGGATTGTGCTTGTGACAGTGTTTCTCTTATGCACTGTGATCCTCTACAGGAACAGGCTTAGCCTTATGCTTAAATCAAAACATAAGAATAAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATCGGTGAAACCATTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCCGCATGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCCACTGATGCTGATGTGAATAAGTTTATACTGCAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCCAAGTCTCTTACTGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAGAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCCAAGAATCCATGGCAAGTTGGAGAGAGGACTGCCCCATATACATACAAGATGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCATTAATTAGTTTGGATCCAGGAGAAGAAATGAAACTTCTAAAGAAACATTTTCAGGAATTTATCTCTGGCCTCATGTCTCTACCAATAAATCTACCAGGAACTAAACTCTATCAATCTTTGCAGGCAAAAAAGAAAATGGTGAAATTAGTGCAGAGAATTATCCTAGCTAAAAGAAATAGTGGCATCTGCAAAGTTCCAAAAGATGTGGTGGATGTGCTTCTTAATGATGCTAGTGAAAAATTAACGGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCACTTCTTATGACTCTAGCTACAAAATATCTATCGGAATGTCCTGCTGCTTTGCAACAATTGACGGAGGAAAATATGAAGCTTAAGAAACTTCAAGATCAGGTTGGGGAATCCTTGAGTTGGAGCGATTACTTATCACTGCCATTTACTCAAACAGTCATCACTGAAACTTTGAGGATGGGAAATATTATAATTGGAGTTATGAGAAAGGCCTTAAAAGATGTTGAAATTAAAGGGCACTTAATACCAAAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAACAACTATGAATGTCCATATCAATTCAATCCTTGGAGGTGGCAAGACAAAGATATGAGCAGTTGCAATTTCTCTCCTTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACACCACTTTGTCACTCAATTCAGATGGCTTGCTGAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAAGAGGATGCCTGTGATGGTCAACGTGTTGTCACCAACATTCCCTGATGATGGCATACCTAAGACTGTTGTGCGAACTCTTGATCAGGGTTCATCTCCTACGAGCATGGACTTTTCATCCACTTCAACGAACTTTACTTCTTGGTCTGCTTCTCTTCTAAGTTCCATGCATGCATTTGCTATCAAATTAAATTGCCATTTGACTTTTATTTGA	1596	0.3972	MDNIWIVLVTVFLLCTVILYRNRLSLMLKSKHKNKLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRRRMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVQESMASWREDCPIYIQDETKKIAFHVLVKALISLDPGEEMKLLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVQRIILAKRNSGICKVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPLLMTLATKYLSECPAALQQLTEENMKLKKLQDQVGESLSWSDYLSLPFTQTVITETLRMGNIIIGVMRKALKDVEIKGHLIPKGWCVFANFRSVHLDDNNYECPYQFNPWRWQDKDMSSCNFSPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWLAEEDTIVNFPTVRMKKRMPVMVNVLSPTFPDDGIPKTVVRTLDQGSSPTSMDFSSTSTNFTSWSASLLSSMHAFAIKLNCHLTFI	531

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo7g00334	531	PANTHER	CYTOCHROME P450 26	33	452	-	-
	Pumo7g00334	531	Pfam	Cytochrome P450	37	451	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	FunFam	3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1	27	471	-	-
	Pumo7g00334	531	Gene3D	Cytochrome P450	27	471	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	PRINTS	E-class P450 group I signature	69	88	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	PRINTS	E-class P450 group I signature	412	422	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	PRINTS	E-class P450 group I signature	380	404	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	PRINTS	E-class P450 group I signature	340	358	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	PRINTS	E-class P450 group I signature	422	445	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo7g00334	531	CDD	CYP90-like	68	466	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo7g00334	Pumo-Chr7	4376548	4384282	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo7g00334	32	444	Cytochrome P450	AT3G13730	69.139	0.0	608

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo7g00334	K12638		-	gmx:100797868	909.442

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