Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00329 ATGGCTTCAAGCTCGGCGGCGGAAGGAGTATCAATGGAGGATTACGAATCCTTGATCGCAACCACCGACGTGGAGCTTCTGAAGCGAGCGTGGCGCAACGAGAAGGCAGCCCCCGAGATTCTCCGCTACGAATCTAATTTGATTTCCCGCGTCAAAGAACAGATTCAACTCATGGAAGAAATTGTGGAGGAGAAAACCAGTGGCGGTAGTGATCCTCTTTCAGTGTCTTTGTATCAAATGGACTTGGATAGAACTCTCTTTCTGTTAAGATCCTACCTCAGGATCCGCATCCAGAAGATTGAAAAGTACGTGTTTCACATCCTAAAAACTGATGAACTTGGAAAAAGGCTATCTAAAGATGAGAAAGATTTTGCCAAAACGTGTGGAAATGACCTAAAGCAACATCTGGAGGAGAGTGTTTTGTCGAAGTTGCCGCAAAATTATCAGTCTGTTGAGAAGCAATCTGAAATAAGTGACGAGGTTGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGCAGAAGTAAAGAGTATCTCACGGGCATTCAACTCGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCACTTCATATGTTACAAATCAATAAAGGCACTTGTAGAGAGTGGCAAAATTGATCTCCTCTAA 678 0.444 MASSSAAEGVSMEDYESLIATTDVELLKRAWRNEKAAPEILRYESNLISRVKEQIQLMEEIVEEKTSGGSDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHILKTDELGKRLSKDEKDFAKTCGNDLKQHLEESVLSKLPQNYQSVEKQSEISDEVDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00329 225 Pfam DNA replication complex GINS protein SLD5 C-terminus 167 225 IPR031633 -
Pumo7g00329 225 CDD GINS_A_Sld5 23 141 IPR038749 -
Pumo7g00329 225 PIRSF GINS_Sld5 1 225 IPR008591 GO:0006261
Pumo7g00329 225 Pfam GINS complex protein 60 121 IPR021151 -
Pumo7g00329 225 Gene3D - 10 215 - -
Pumo7g00329 225 FunFam DNA replication complex GINS protein SLD5 8 215 - -
Pumo7g00329 225 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Pumo7g00329 225 SUPERFAMILY PriA/YqbF domain 169 225 - -
Pumo7g00329 225 CDD GINS_B_Sld5 167 225 IPR031633 -
Pumo7g00329 225 PANTHER SLD5 PROTEIN 8 225 IPR008591 GO:0006261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00329 Pumo-Chr7 4345866 4349151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00329 1 163 Core DNA Replication Machinery Family AT5G49010 63.190 2.33e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00329 K10735 - gmx:100784291 384.03