Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00326 ATGTCTCCTACCATCGTTTCTGCTGTTGTTTTCCTGGGTTGTGCTCTTTTCAATAGTGCCCCGTTGAATGCCGGAACCATTTTCACAGTTTTTGCAACGTTGAGGAACTTGTCTGAACCTGTTCAAATTATCCCAGAGGCTCTATCTATGTTGATCCAAGTTAAGGTATCCTTTGATCGTCTCAATACCATTTTGCTTGATGAAGAGATAGATAGTAGTGACGGTAACAGAAGAAATATAATCCGAAGTTCAGTTATTGCTGTGGAAATCCAAGCTGGCAATTTCATTTGGGATCACGAATCAGCATCCCCAACTTTAAGAGATGTGAATTTAGAAATCAAACGAGGACAGAAAATTGCAGTTTGTGGCCCAGTTGGAGCTGGAAAATCGTCTCTTTTATTAGCAGTACTTGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGTGTCTGGCACCGTAGCCTATGTTTCTCAAACTTCTTGGATTCAAAGTGGGACAGTTCGAGATAATATACTATTCGGCAAGCCAATGGACAAAACAAGATATGATAATGCCATTAAAGTTTGTGCTTTAGATAAGGATATTAATGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAACGCGGGATTAACTTGAGTGGAGGACAAAAGCAAAGGATCCAACTAGCTCGTTCAGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATTCTGTTCAATGACTGTGTAATGAGGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACAATCCTGGTAATGGAAGGTGGAAAAGTTACACAATCAGGTAATTATGAAAATCTCTTGACAGCTGGGACAGCCTTTGAACAACTTGCTTCATCAGATTTAAGTATTTTGGATTTTGATATACCTTATTCCATCACTTTTGTAGCATCTGTTCCAATTGAAATTTTGATGATAGTTTGTATAATGGCTTACGTAACATGGCAAGTTCTCATTGTTGCTGTTCCGGCAATGGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCAGCAAGGGAATTAATAAGGATAAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCAGCTGAGACATCACTTGGTGTGGTTACTGTAAGAGCATTTAACATGGCAGACAGATTTTTTAAAAATTACTTAAAACTTGTCGACACAGACGCGACACTGTTCTTTCATTCTAATGCGGCCATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTGCAGCTTTATTACTTGTTCTAGTTCCTCAGGGATACGTGTCCCCAGGCCTTGTGGGGCTGTCTCTTTCTTATGCTTTCACCTTGACAGGAACCCAAATATTTTTGACTCGATGGTATTGCAACTTATTAAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACCTTCCAGCAGAGCCTCCTGCCATTGTGGAGGACAACCGGCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATAAGATATCGTCCTAATGCCCCATTAGTGCTTAAGGGTATTACTTGTACGTTTAAGGAAGGGAACAGAGTGGGAGTTGTAGGAAGGACCGGAAGCGGAAAAAGTACACTGATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAAGAGGTGATATTCTTATAGATGGGATTAACATATGCTCAATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACACTTTTCAAGGGAAGCATTAGAACCAACTTGGACCCTCTAGGCCTGTACTCAGATGATGATATATGGAAGGCTTTAGAAAAATGTCAGCTTAAAGAAACTATCAGCCGTCTACCAAATCTCTTGGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTGTTTTGTCTTGGAAGAGTACTGCTTAAGAGGAATAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTACCACAGATGCCATTCTACAACAAATAATTAGACAAGAATTTGTAGAATGCACAGTTATAACCGTGGCTCACAGGGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTATCCTATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGCTCATGGACACCAATTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGGAAGAATTCCTCTGCAAATATTAGCAGGCAGCAACATTGA 2340 0.4068 MSPTIVSAVVFLGCALFNSAPLNAGTIFTVFATLRNLSEPVQIIPEALSMLIQVKVSFDRLNTILLDEEIDSSDGNRRNIIRSSVIAVEIQAGNFIWDHESASPTLRDVNLEIKRGQKIAVCGPVGAGKSSLLLAVLGEIPKISGTVNVSGTVAYVSQTSWIQSGTVRDNILFGKPMDKTRYDNAIKVCALDKDINDFSHGDLTEIGQRGINLSGGQKQRIQLARSVYNDADIYLLDDPFSAVDAHTAAILFNDCVMRALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYENLLTAGTAFEQLASSDLSILDFDIPYSITFVASVPIEILMIVCIMAYVTWQVLIVAVPAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMADRFFKNYLKLVDTDATLFFHSNAAMEWLVLRIEALQNLTVITAALLLVLVPQGYVSPGLVGLSLSYAFTLTGTQIFLTRWYCNLLNYIISVERIKQFIHLPAEPPAIVEDNRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGNRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDIWKALEKCQLKETISRLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQQIIRQEFVECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSSANISRQQH 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00326 779 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 309 763 - -
Pumo7g00326 779 FunFam Multidrug resistance protein associated1 66 319 - -
Pumo7g00326 779 SMART AAA_5 553 745 IPR003593 GO:0016887
Pumo7g00326 779 SMART AAA_5 115 288 IPR003593 GO:0016887
Pumo7g00326 779 Pfam ABC transporter transmembrane region 310 477 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g00326 779 CDD ABCC_MRP_domain2 525 745 - -
Pumo7g00326 779 Gene3D ABC transporter type 1, transmembrane domain 1 76 IPR036640 GO:0005524|GO:0016020
Pumo7g00326 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 310 IPR027417 -
Pumo7g00326 779 Gene3D - 510 761 IPR027417 -
Pumo7g00326 779 FunFam ABC transporter C family member 3 510 761 - -
Pumo7g00326 779 CDD ABC_6TM_ABCC_D2 310 502 IPR044726 GO:0140359
Pumo7g00326 779 Gene3D - 84 306 IPR027417 -
Pumo7g00326 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 760 IPR027417 -
Pumo7g00326 779 Gene3D ABC transporter type 1, transmembrane domain 307 508 IPR036640 GO:0005524|GO:0016020
Pumo7g00326 779 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 529 761 IPR003439 GO:0005524
Pumo7g00326 779 Pfam ABC transporter 106 240 IPR003439 GO:0005524
Pumo7g00326 779 SUPERFAMILY ABC transporter transmembrane region 309 509 IPR036640 GO:0005524|GO:0016020
Pumo7g00326 779 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 311 IPR003439 GO:0005524
Pumo7g00326 779 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Pumo7g00326 779 Pfam ABC transporter 544 692 IPR003439 GO:0005524
Pumo7g00326 779 CDD ABCC_MRP_domain1 88 288 - -
Pumo7g00326 779 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 490 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00326 Pumo-Chr7 4285467 4289588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00326 525 759 Calmodulin-binding Proteins AT2G36910 31.535 1.50e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00326 - - csat:109125179 1075.46