Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00325 ATGGGATGTGCGCTTTTCCAGAGTGCCCCTTTGAATGCTGCAACTATCTTCTCAGTTCTTGCAGCATTGAGAAGCATGGGAGAACCTGTCACATTGATTCCAGAAGCACTCTCTGTTCTGATCCAAGTTAAGGTCTCCTTTGATCGTCTCAACACCTTTTTGCTTGATGATGAGATAAAAAGTGATGATATTAGAAGAACTTCCAAACAAGATTCTTGCAGCAAGAGTGTTGAAATTCTAGCAGGCAACTTCAGTTGGGATCAGCAATCAGTGCCTCCAACTTTGAGGAAAGTGAATTTTGAGATCAAGTGGGGGCAGACAGTAGCAGTTTGTGGCCCAGTTGGAGCTGGAAAAACATCTCTCCTATATGCAATACTTGGAGAGATACCCAGAATTTCAGGAACTGTTAGTGTAGGTGGAACACTTGCCTACGTTTCCCAAACTCCTTGGATCCAAAGTGGTACAATTCGTGATAATATTCTCTATGGAAAACCAATGGATGAAACCAGGTATGAATATACCATTAAGGTCTGTGCTTTGGATAAGGATATTGATGGATTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTATAATGATGCTGATATCTATCTCCTAGATGACCCTTTTAGTGCTGTAGATGCTCATACTGCTTCTATTCTGTTTAATGATTGTGTCAGGGTTGCTTTAAGAAGGAAAACAGTTATTCTTGTGACTCATCAAGTTGAATTTCTCTCAGAAGTTGATAAAATCCTGGTAATGGAAAGAGGAAAAATTACTCAATCGGGTAGTTATGAAGATCTGTTGACAGCTGGAACAGCCTTTGAACAGCTTTTGAGTGCTCATAGAGAGGCAATTACAGGGATAAAAAAAAGTAGTGCAAACAAAAGAGAAGTTGAAAATGTGGTTACGGCTTCATCAGATTTGAGTATTTTAGATTTTGATATCCCTTTTTCCACCATCTTTGTAACGGCTGAAATAGCTGAACTTCTGACAATGATTGGGATAATGGTTTCGGTCACATGGCAAGTGCTCATTGTTGCAGTCCTTGCCATGGTGGCCTCAAAATATGTTCAGGGCTATTATCAAGCCTCTGCTAGAGAAATTATACGGATCAATGGAACTACAAAAGCTCCTCTTATGAATTTTACAGCTGAGACATCACTTGGTGCGGTTACTATAAGAGCTTTCAACATGGTTGACAGATTTTTCAAAAACTACCTTAACCTTGTTGACAAAGATGCCTCAATGTTCTTTCATTCCAATGCTGCCATCGAATGGTTAATTCTAAGGATTGAATTACTTCAAAATTTGACACTCTTCACTGCAGCTTTGTTGCTTGTTCTTCTTCCAAAGGGATATGTGGCCCCTGGCCTTGTGGGACTTTCTCTGTCTTATGCTTTTTCATTGACAGCAACCGTAGTTTATCTGACTCGAATGTTTTGTAACTTGTCAAACTATGTGATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCAGAGCCTAGTGCAATTGTAGAGGATAATAGACCACTACCTTCTTGGCCTTCCAAGGGTAGAATAGATCTCCAATCTCTAGAGATTAGATATCGTCCAAATGCTCCATTAGTTCTTAAGGGCATCTCTTGTAGGTTTAAAGAAGGGAGTAGAGTGGGAGTCGTGGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTCTGTTTCGCTTAGTTGAGCCTACTAGAGGTGACATTATTATAGATGGGATTAATATATGCTCAATAGGGCTAAAAGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGTAGCATTCGAAAGAACTTGGACCCTCTATGCCTGTACTCTGACGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGCAACAATTAGTAGTCTACCAAATCTCTTAGGACACTCCTGTCTAATTCTGAACAAATTAACAGTGAGTGATGAAGGTGAAAACTGGAGTGTGGGGCAGCGCCAACTCATATGTCTAGGAAGAGTGCTTCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGTTATTCTACAACGAGTCATCAGACAAGAATTTTCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGAAATGGTCATGGTCCTATCTTATGGGAAACTGGTGGAGTATGACAAGCCTTCAAAGCTTATGGCTACTAACTCTTCATTTTCTAAGCTGGTAGCTGAATATTGGTCCAATTGCAATAGGAATTTGCTCCCAAAAGATTAG 2394 0.4014 MGCALFQSAPLNAATIFSVLAALRSMGEPVTLIPEALSVLIQVKVSFDRLNTFLLDDEIKSDDIRRTSKQDSCSKSVEILAGNFSWDQQSVPPTLRKVNFEIKWGQTVAVCGPVGAGKTSLLYAILGEIPRISGTVSVGGTLAYVSQTPWIQSGTIRDNILYGKPMDETRYEYTIKVCALDKDIDGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASILFNDCVRVALRRKTVILVTHQVEFLSEVDKILVMERGKITQSGSYEDLLTAGTAFEQLLSAHREAITGIKKSSANKREVENVVTASSDLSILDFDIPFSTIFVTAEIAELLTMIGIMVSVTWQVLIVAVLAMVASKYVQGYYQASAREIIRINGTTKAPLMNFTAETSLGAVTIRAFNMVDRFFKNYLNLVDKDASMFFHSNAAIEWLILRIELLQNLTLFTAALLLVLLPKGYVAPGLVGLSLSYAFSLTATVVYLTRMFCNLSNYVISVERIKQFIHIPAEPSAIVEDNRPLPSWPSKGRIDLQSLEIRYRPNAPLVLKGISCRFKEGSRVGVVGRTGSGKTTLISALFRLVEPTRGDIIIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRKNLDPLCLYSDDEIWKALEKCQLKATISSLPNLLGHSCLILNKLTVSDEGENWSVGQRQLICLGRVLLKRNRILVLDEATASIDSATDVILQRVIRQEFSECTVITVAHRVPTVIDSEMVMVLSYGKLVEYDKPSKLMATNSSFSKLVAEYWSNCNRNLLPKD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00325 797 Pfam ABC transporter transmembrane region 325 486 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g00325 797 FunFam Multidrug resistance protein associated1 55 320 - -
Pumo7g00325 797 Gene3D - 75 306 IPR027417 -
Pumo7g00325 797 Gene3D ABC transporter type 1, transmembrane domain 312 523 IPR036640 GO:0005524|GO:0016020
Pumo7g00325 797 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 324 783 - -
Pumo7g00325 797 Pfam ABC transporter 559 715 IPR003439 GO:0005524
Pumo7g00325 797 SMART AAA_5 568 769 IPR003593 GO:0016887
Pumo7g00325 797 SMART AAA_5 104 277 IPR003593 GO:0016887
Pumo7g00325 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 299 IPR027417 -
Pumo7g00325 797 FunFam ABC transporter C family member 3 525 784 - -
Pumo7g00325 797 Pfam ABC transporter 95 229 IPR003439 GO:0005524
Pumo7g00325 797 CDD ABCC_MRP_domain1 77 277 - -
Pumo7g00325 797 ProSitePatterns ABC transporters family signature. 202 216 IPR017871 GO:0005524|GO:0016887
Pumo7g00325 797 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 505 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g00325 797 CDD ABCC_MRP_domain2 540 768 - -
Pumo7g00325 797 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 544 784 IPR003439 GO:0005524
Pumo7g00325 797 SUPERFAMILY ABC transporter transmembrane region 324 522 IPR036640 GO:0005524|GO:0016020
Pumo7g00325 797 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 300 IPR003439 GO:0005524
Pumo7g00325 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 531 783 IPR027417 -
Pumo7g00325 797 CDD ABC_6TM_ABCC_D2 325 517 IPR044726 GO:0140359
Pumo7g00325 797 Gene3D - 525 784 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00325 Pumo-Chr7 4258265 4262501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00325 540 782 Calmodulin-binding Proteins AT2G36910 29.032 7.33e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00325 - - csat:109125179 971.844