Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00295 ATGGAAACTACTGATGGCAATAATCAGCCCCCAAAGTTCGACCTGTATCTCGGGGTCAACTACTTGGCCTCTGTTAACTTGTCAAATTATTTCTATTACGTTGGCGAGATCATTCATGCTCCCACAACAGACACCATACAAGTATGTCTCGTTAATACTGGCTCTGGAATACCTATCATTTCGGCATTAGAGTTACGACCATTAAGCACTTCCATTTACCCAATCACGTCACAATCATTACTATACCTCGAAACACGCTTTGATGTTGGTGGCACTACTACAACCTATTTTAGAAGGTACAAGGACGATATCTATGATCGCTTCTGGCACTGGCGCAATGTTCATCAAGATTGGTATAACATCAATACAACCACAGATGTTAATAAAACTGACAATGATATTTATCAAGTACCAGCTCAAGTCTTGAAAACCGCAATGCGGTCATTCAATCGCTCATATGAGTTAAACTATGATTATGACCGTGAGATGTCACGGTTGGACAAGTCTTCCCAATATTATGTATACTTTCACTTTGTTGAAATTGAACAGCTTGCTCCAGGGCTTAGAAGGATAATGGACATCACTCTCAACGATGAAAACATACTCCCAGAGCCTATAACTCTTGAATATATGAAGCCACTCACTATAAGTAACAAAAATGCAACTCAAGGTTTTGTTCGCTTTTCTATTAAAGCAACTGCAGAATCTGATGCTCCCCCAATTCTCAATGCTTTTGAGGTTTATAAATTAATAACAGGTCTAAATTCACCAACAGATATTAAAGATGTTGATGCCATCGTGAACATCAAACACTACTATGGGATATCCAGAATTGATTGGCAGGGAGACCCATGTGTACCAAAAGCATTGAGATGGAGTGGCCTGAACTGCAGCTACGGCATCAATCCTAGAATAATATCATTGGACCTTAGCTCAAGCGAACTACGAGGGGAGATAGCCGCTTCAATCTCAGATCTTTCAGAACTACAGTCCCTGGATATGTCAGATAACAGTTTAACTGGTTCTGTGCCCGAGTCATTATCGCAACTGGAGTACCTGAGGATTTTTTCAAAATTAGTTACTAAATCACGGAAGTTTTGTGTTAGTGTTGATGGAAATCAAAATCTTTGCACCTCAACTCCATGCCACAAGAGAAACAAGTTTGTAATTCCGTTGGTAGTAACACTTGTGGGAGCCTTCATCCTTTCGGCATTATCACTATTTGTTTTAAGAAGAGTACAAGTTGTTAAGAGTATAAAAAAGTTGTGTTTTTCCAACAAAATTAAATATGTGGACTCGAAGAAACAAGAGTTCACCTACTCAGAGGTTCAAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACTATGGTTGCATAGGAGAAACACAAGTAGCCGTGAAGATGATCTCTCCTTCAACTCAAGGTGTTCAGCAATTTCAGACAGAGGCAAAAATTCTCACTAGAGTACACCATAGATGCTTGACTCCACTTATTGGATATTGCAATGAAGGCACGAGAACAGCTCTCATCTATGAATACATGACCAACGGAGACCTAGCTGAGAAACTATTATCAGGTGAAAGTCAAACATTCTTAGATTGGGAACAGAGACTTCAAATTGCTTTGGATTCTGCAATAGGCTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTGTTCACAGAGATGTTAAGACTAGAAATATTTTACTCAACGAAAATCTCCAAGGTAAAATATCTGATTTTGGATTGTCAAGGATCTTTTCAAATGAAGGTGACACCCATGTATCAACAGCAATTGCAGGCACCCCAGGGTACCTTGACCCAGAATACTACATAACAAACAGGCTGAATGAAAAAAGTGACGTGTTTAGTTTTGGAGTTGTTCTACTAGAGATAATCACGGGGAGGGCAGCTATCTTGAAAAGTGCCCATGAGAAAACTCACATAAGTCATTGGGTAAATTCCATGCGAGCTGATCATAATGGTGAAATTGATAGTATTATGGATGCAAGGTTACAAGGAGAATATGACAGTGAGGCTGCAAGGAAAGTAGTAGATGTTGCAATGGGCTGTGTAGCTCCGAGTTCTGTTAATAGGCCAACAATGAATCAAGTGGTGACGGAATTAAAACAATGTTTGCCCGTGGGGAAACTTGGGAGTACGTCCACTGGATCCAGTGAAATTGTCTCTGCGGATGAAATTAGTGGACTTAGTTCTCTGGCGAGGTAA 2256 0.4003 METTDGNNQPPKFDLYLGVNYLASVNLSNYFYYVGEIIHAPTTDTIQVCLVNTGSGIPIISALELRPLSTSIYPITSQSLLYLETRFDVGGTTTTYFRRYKDDIYDRFWHWRNVHQDWYNINTTTDVNKTDNDIYQVPAQVLKTAMRSFNRSYELNYDYDREMSRLDKSSQYYVYFHFVEIEQLAPGLRRIMDITLNDENILPEPITLEYMKPLTISNKNATQGFVRFSIKATAESDAPPILNAFEVYKLITGLNSPTDIKDVDAIVNIKHYYGISRIDWQGDPCVPKALRWSGLNCSYGINPRIISLDLSSSELRGEIAASISDLSELQSLDMSDNSLTGSVPESLSQLEYLRIFSKLVTKSRKFCVSVDGNQNLCTSTPCHKRNKFVIPLVVTLVGAFILSALSLFVLRRVQVVKSIKKLCFSNKIKYVDSKKQEFTYSEVQSITNNFERVVGKGGFGTVYYGCIGETQVAVKMISPSTQGVQQFQTEAKILTRVHHRCLTPLIGYCNEGTRTALIYEYMTNGDLAEKLLSGESQTFLDWEQRLQIALDSAIGLEYLHNGCKPPIVHRDVKTRNILLNENLQGKISDFGLSRIFSNEGDTHVSTAIAGTPGYLDPEYYITNRLNEKSDVFSFGVVLLEIITGRAAILKSAHEKTHISHWVNSMRADHNGEIDSIMDARLQGEYDSEAARKVVDVAMGCVAPSSVNRPTMNQVVTELKQCLPVGKLGSTSTGSSEIVSADEISGLSSLAR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00295 751 Gene3D Ribonuclease Inhibitor 268 381 IPR032675 -
Pumo7g00295 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Pumo7g00295 751 PANTHER OS07G0107800 PROTEIN-RELATED 5 722 - -
Pumo7g00295 751 SUPERFAMILY L domain-like 290 355 - -
Pumo7g00295 751 FunFam Leucine-rich repeat receptor-like kinase 261 379 - -
Pumo7g00295 751 Gene3D Phosphorylase Kinase; domain 1 430 521 - -
Pumo7g00295 751 Pfam Malectin-like domain 5 249 IPR024788 -
Pumo7g00295 751 ProSiteProfiles Protein kinase domain profile. 448 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00295 751 Gene3D Transferase(Phosphotransferase) domain 1 522 727 - -
Pumo7g00295 751 Gene3D - 84 250 - -
Pumo7g00295 751 SMART serkin_6 448 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00295 751 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 522 728 - -
Pumo7g00295 751 SUPERFAMILY Protein kinase-like (PK-like) 433 718 IPR011009 -
Pumo7g00295 751 Pfam Protein tyrosine and serine/threonine kinase 450 718 IPR001245 GO:0004672|GO:0006468
Pumo7g00295 751 ProSitePatterns Protein kinases ATP-binding region signature. 454 475 IPR017441 GO:0005524
Pumo7g00295 751 CDD STKc_IRAK 454 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00295 Pumo-Chr7 3830441 3836156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00295 12 722 Receptor kinase-like Gene Family AT1G51800 44.740 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g00295 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00295 - - gmx:102663143 1171.38