Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00294 ATGTCATGGTACAAATATGATGTTTATGACCGCATCTGGGTGCCTCATGTATTCAACCAGTGGACACAATTAAGCAGCACACTTAATCTTCTTGATATATTCCAGAATGATTATAAACTACCAGAAGTTGTCATGAGCACTGCTGCTACACCAATAAATGCTAGTGCTCCTTTTCGGTTCTATTGGGATCCAGATAATGTGAATGAGCAATTTTACATCTACATGCACTTTAGTGAGGTTGAAATTCTGGCAGAAAATGAGACTAGAACATTCAATATCTTCATGAATGGCAAGTTATTTTATGGACCTCTGACTCCTGGATATCTGATGACAAATACCATATATAGTAAATCAGCTTTGACTGGAGCTACAAGGTATCTATTTTCTCTTGAAAAGACAGGGACTTCTACCCATCCACCCATCATTAATGCCGTGGAGATTTATAAAGTAATAGATTTTCCACAATCAGAAACAGAACAAGATGATGTTGATGCTATCACAAACATCAAAAACGCTTATGGGGTGGATAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCATACATTTGGGAAGGTCTAAATTGTAGTTATGATGGTGATAACACCCCAAGAATCACATTCTTGAATTTGTCTTCAAGTGGACTGACCGGGCAGATATCATCTTTCATCTCCGAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGTTTAAGCGGGTCAGTACCTGATATTCTGACGCAACTGCAATCATTAAAAGTCTTAAACTTGGCGAATAACAACCTTACTGGTCCAGTTCCCGGAGGACTTGTTGAAAGATCAAAGGAAGGTTCACTATCATTGAGCCTGGAGCAAAATCCAAATCTATGTGAATCTGCTCCATGCATCCAGCAGACAAATAACAAGCAGCCAGATGCTGATCAGAAGAACAAAAATAATATAGTTATTCCTGTAGTAGCATCGGTTGCTGGGATTTTGGTGCTCCTAATAATTGTAGCAGCAGCTATATTCTGTGGCCTTAAAAAGAGAAAACCACAAGCATCTGTGAACATTGATGTTGAGACCAATACTCCAAATGGATCACAACTTGAATCAAAGCAACGGCAATATACATTCAATGAGCTTGTTAAGATCACCAACAACTTTGCCAGAGTTCTTGGTAGAGGTGGATTTGGAAAAGTTTATCATGGATTTATTGATGACACTCAAGTAGCTGTAAAGATGCTTTCTCCATCAGCAGTACGAGGATATGAACAATTTCTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAGAAATCTGACTTCTCTTGTGGGGTATTGCAATGAAGAAAACAATATAGGGCTCATCTATGAATATATGGCAAATGGAAACTTGGATGAAATTCTTTCAGGAAAAAATAGCAGGGCAAAGTTCTTGACATGGGAAGAGAGACTCCAAATAGCACTGAGTGCAGCTCAAGGACTGGAATATCTGCATAACGGTTGTAAGCCACCAATAATCCACAGAGATGTGAAATGTGCAAATATTTTATTAAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGGCTATCCAAAAGCTTTCCCGCAGACGGGGGCTCTTATATGTCCACTGTTGTTGCTGGAACTCCCGGTTATTTGGATCCTGAGTACAGCATATCAAGCAGGTTGACAGAGAAAAGTGATGTTTACAGCTTTGGAGTTGTTCTTTTGGAGATGGTCACAGGTCAGCCAGCTATAGCTAAAACGTTTGAGAAGACTCACATAAGTCAGTGGGTTAGATCCATGCTCTCTAATGGGGATATAAAAAATATTGCTGACTCAAGGTTACAAGAAGATTTTGACACTGGCTCAGTCTGGAGAGTCGTTGAAATAGGAATGGCTTCTGTGTCCACTGGTCCTGCCAAAAGGCCAAGTATGAGTGAGATAGTGAACGAGCTAAAAGAGTGTTTGACTACGGAATTAGATCGAAAATATAGTGGTCGTGGCACTGAAAACAATGACTCAATTGAGTTGGTCACTCTGAATTTCACTACTGAACTTGGTCCCCCAGCTAGGTAG 2073 0.398 MSWYKYDVYDRIWVPHVFNQWTQLSSTLNLLDIFQNDYKLPEVVMSTAATPINASAPFRFYWDPDNVNEQFYIYMHFSEVEILAENETRTFNIFMNGKLFYGPLTPGYLMTNTIYSKSALTGATRYLFSLEKTGTSTHPPIINAVEIYKVIDFPQSETEQDDVDAITNIKNAYGVDRNWQGDPCGPVAYIWEGLNCSYDGDNTPRITFLNLSSSGLTGQISSFISELTMLQYLDLSNNSLSGSVPDILTQLQSLKVLNLANNNLTGPVPGGLVERSKEGSLSLSLEQNPNLCESAPCIQQTNNKQPDADQKNKNNIVIPVVASVAGILVLLIIVAAAIFCGLKKRKPQASVNIDVETNTPNGSQLESKQRQYTFNELVKITNNFARVLGRGGFGKVYHGFIDDTQVAVKMLSPSAVRGYEQFLAEVKLLMRVHHRNLTSLVGYCNEENNIGLIYEYMANGNLDEILSGKNSRAKFLTWEERLQIALSAAQGLEYLHNGCKPPIIHRDVKCANILLNENFQAKLADFGLSKSFPADGGSYMSTVVAGTPGYLDPEYSISSRLTEKSDVYSFGVVLLEMVTGQPAIAKTFEKTHISQWVRSMLSNGDIKNIADSRLQEDFDTGSVWRVVEIGMASVSTGPAKRPSMSEIVNELKECLTTELDRKYSGRGTENNDSIELVTLNFTTELGPPAR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00294 690 SMART serkin_6 382 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00294 690 ProSiteProfiles Protein kinase domain profile. 382 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00294 690 Gene3D Ribonuclease Inhibitor 163 291 IPR032675 -
Pumo7g00294 690 PANTHER OS07G0107800 PROTEIN-RELATED 4 655 - -
Pumo7g00294 690 Pfam Leucine Rich repeats (2 copies) 228 264 IPR025875 -
Pumo7g00294 690 ProSiteProfiles Leucine-rich repeat profile. 229 251 IPR001611 GO:0005515
Pumo7g00294 690 FunFam Leucine-rich repeat receptor-like kinase 161 294 - -
Pumo7g00294 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Pumo7g00294 690 Pfam Protein tyrosine and serine/threonine kinase 384 651 IPR001245 GO:0004672|GO:0006468
Pumo7g00294 690 PRINTS Leucine-rich repeat signature 230 243 - -
Pumo7g00294 690 PRINTS Leucine-rich repeat signature 251 264 - -
Pumo7g00294 690 Pfam Malectin-like domain 4 150 IPR024788 -
Pumo7g00294 690 Gene3D Phosphorylase Kinase; domain 1 369 456 - -
Pumo7g00294 690 Gene3D Transferase(Phosphotransferase) domain 1 457 673 - -
Pumo7g00294 690 FunFam Leucine-rich repeat receptor-like protein kinase 360 456 - -
Pumo7g00294 690 SUPERFAMILY Protein kinase-like (PK-like) 364 651 IPR011009 -
Pumo7g00294 690 CDD STKc_IRAK 388 653 - -
Pumo7g00294 690 ProSitePatterns Protein kinases ATP-binding region signature. 388 409 IPR017441 GO:0005524
Pumo7g00294 690 SUPERFAMILY L domain-like 163 272 - -
Pumo7g00294 690 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 457 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00294 Pumo-Chr7 3796507 3800440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00294 7 690 Receptor kinase-like Gene Family AT1G51850 50.215 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g00294 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00294 - - gmx:100779474 1236.09